RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CDK1P06493 297 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 CHATP28329 748 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 HTR2CP28335 458 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 DGCR2P98153 550 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 OR8U1Q8NH10 309 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 SETD6Q8TBK2 473 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 IL1F10Q8WWZ1 152 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 THRSPQ92748 146 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 MND1Q9BWT6 205 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
CCDC9-202ENST00000595659 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
CCDC9-202ENST00000595659 YPEL1O60688 119 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 IGF1P05019 195 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 SAA2P0DJI9 122 aaPredicted RBP13.3□□□□□ -0.28
CCDC9-202ENST00000595659 RPS27AP62979 156 aaKnown RBP13.3□□□□□ -0.28
CCDC9-202ENST00000595659 HTD2P86397 168 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 GLT8D1Q68CQ7 371 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 MS4A15Q8N5U1 240 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 TMEM203Q969S6 136 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 GALMQ96C23 342 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 YPEL2Q96QA6 119 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 OR5B12Q96R08 314 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 PRR25Q96S07 402 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 ZNF251Q9BRH9 671 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 TMEM59Q9BXS4 323 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 ANKRD60Q9BZ19 345 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 CHMP1AQ9HD42 196 aaPredicted RBP13.3□□□□□ -0.28
CCDC9-202ENST00000595659 PARP11Q9NR21 331 aa13.3□□□□□ -0.28
CCDC9-202ENST00000595659 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 UBBP0CG47 229 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 SRMP19623 302 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 PSMB8P28062 276 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 UNC119Q13432 240 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 SPHARQ15513 63 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 MED22Q15528 200 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 HMGN3Q15651 99 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 HSD17B12Q53GQ0 312 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 C1orf100Q5SVJ3 147 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 ZNF833PQ6ZTB9 187 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 ZNF554Q86TJ5 538 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 OR2AK2Q8NG84 335 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 B9D2Q9BPU9 175 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 PARP12Q9H0J9 701 aaKnown RBP13.29□□□□□ -0.28
CCDC9-202ENST00000595659 GNB4Q9HAV0 340 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 ABRACLQ9P1F3 81 aa13.29□□□□□ -0.28
CCDC9-202ENST00000595659 LSM2Q9Y333 95 aaKnown RBP13.29□□□□□ -0.28
CCDC9-202ENST00000595659 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 SEC14L6B5MCN3 397 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 ATP6V0E1O15342 81 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 NBR2O15453 112 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 RGS11O94810 467 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 BLVRBP30043 206 aaPredicted RBP13.28□□□□□ -0.28
CCDC9-202ENST00000595659 ECI1P42126 302 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 QRFPP83859 136 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 P2RY14Q15391 338 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 RPL39P5Q59GN2 51 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 LIPKQ5VXJ0 399 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 TMEM65Q6PI78 240 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 HDHD3Q9BSH5 251 aaPredicted RBP13.28□□□□□ -0.28
CCDC9-202ENST00000595659 IFI27L2Q9H2X8 130 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 OR51J1Q9H342 316 aa13.28□□□□□ -0.28
CCDC9-202ENST00000595659 NKX1-2Q9UD57 310 aaPredicted RBP13.28□□□□□ -0.28
CCDC9-202ENST00000595659 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 TMEM14DPA8MWL7 114 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 PPIFP30405 207 aaKnown RBP13.27□□□□□ -0.29
CCDC9-202ENST00000595659 KIAA0141Q14154 515 aaPredicted RBP13.27□□□□□ -0.29
CCDC9-202ENST00000595659 C5orf64Q2M2E5 130 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 C9orf66Q5T8R8 295 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 RNLSQ5VYX0 342 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 LIN54Q6MZP7 749 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 FAM131AQ6UXB0 335 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 GLDNQ6ZMI3 551 aaPredicted RBP13.27□□□□□ -0.29
CCDC9-202ENST00000595659 SVOPQ8N4V2 548 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 ABHD14BQ96IU4 210 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 VCXQ9H320 206 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 PLEKHJ1Q9NW61 149 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 STEAP1Q9UHE8 339 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 SCOCQ9UIL1 159 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 LRRC42Q9Y546 428 aa13.27□□□□□ -0.29
CCDC9-202ENST00000595659 TRAV41A0A0B4J266 112 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 SLC22A1O15245 554 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 SOCS1O15524 211 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 NAPSAO96009 420 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 UCHL1P09936 223 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 HSMCR30P0CW71 290 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 OR5H8P0DN80 308 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 GNB1P62873 340 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 NDPQ00604 133 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 ZNF260Q3ZCT1 412 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms