RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CCNOP22674 350 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 IGFBP4P22692 258 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 CYB561P49447 251 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 PSMB3P49720 205 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 PLP2Q04941 152 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 CLN3Q13286 438 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 BSXQ3C1V8 233 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 Q8IYB0 196 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 ZBTB34Q8NCN2 500 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 OR1P1Q8NH06 330 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 SSX3Q99909 188 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 GPR87Q9BY21 358 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 RBKSQ9H477 322 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 OR1A1Q9P1Q5 309 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 SDK2Q58EX2 2172 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 B4E171 279 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 IGHV3-9P01782 118 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 CEACAM6P40199 344 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 TSPAN7P41732 249 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 PDLIM4P50479 330 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 PMS2CLQ68D20 193 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 SNX22Q96L94 193 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 NOL4LQ96MY1 436 aaPredicted RBP11.21□□□□□ -0.61
VRK3-209ENST00000594948 OR5B12Q96R08 314 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 MBNL3Q9NUK0 354 aaKnown RBP11.21□□□□□ -0.61
VRK3-209ENST00000594948 WIPI2Q9Y4P8 454 aa11.21□□□□□ -0.61
VRK3-209ENST00000594948 COL27A1Q8IZC6 1860 aaPredicted RBP11.21□□□□□ -0.62
VRK3-209ENST00000594948 PINLYPA6NC86 204 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 SYNGR4O95473 234 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 NGFP01138 241 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 GCGP01275 180 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 TYMSP04818 313 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 HOXA6P31267 233 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 LHX2P50458 406 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.62
VRK3-209ENST00000594948 RPL23P62829 140 aaKnown RBP11.21□□□□□ -0.62
VRK3-209ENST00000594948 MSMO1Q15800 293 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 ADIRFQ15847 76 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 SSX9Q7RTT3 188 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 RAB24Q969Q5 203 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 HSPB7Q9UBY9 170 aa11.21□□□□□ -0.62
VRK3-209ENST00000594948 CEP290O15078 2479 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 A0A087X0M5 115 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 A0A096LPE4 126 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 A0A1B0GX30 115 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 A0A1W2PPZ6 126 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 ZNF503-AS2A6NEH8 195 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 H7BYZ3 331 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 VENTXO95231 258 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 HRASP01112 189 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 CCL2P13500 99 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 OTX2P32243 289 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
VRK3-209ENST00000594948 CLDN18P56856 261 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 SSPNQ14714 243 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 RPP25LQ8N5L8 163 aaKnown RBP11.2□□□□□ -0.62
VRK3-209ENST00000594948 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 ZNF488Q96MN9 340 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 MRPL37Q9BZE1 423 aaKnown RBP11.2□□□□□ -0.62
VRK3-209ENST00000594948 B4GALT7Q9UBV7 327 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 PPP1R3CQ9UQK1 317 aa11.2□□□□□ -0.62
VRK3-209ENST00000594948 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 UBE2L5PA0A1B0GUS4 154 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 J3QW42 95 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 LY86O95711 162 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 AMBPP02760 352 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 P0C879 139 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 GALR1P47211 349 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 COL10A1Q03692 680 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 TUSC5Q8IXB3 177 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 APH1AQ96BI3 265 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 RHOVQ96L33 236 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 RTL8AQ9BWD3 113 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 FSCN3Q9NQT6 498 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 FREM1Q5H8C1 2179 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 DOCK10Q96BY6 2186 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 KIAA2026Q5HYC2 2103 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 SLC31A2O15432 143 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms