RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SUCNR1Q9BXA5 334 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 OR2S2Q9NQN1 319 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 KBTBD11-OT1A0A1B0GTJ5 212 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 C5orf51A6NDU8 294 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 F2RL2O00254 374 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 HSD17B6O14756 317 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 IGHV4-39P01824 125 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 PPP1CCP36873 323 aaKnown RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 LUMP51884 338 aaPredicted RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 SRSF4Q08170 494 aaKnown RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 NINJ1Q92982 152 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
VRK3-207ENST00000594092 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
VRK3-207ENST00000594092 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
VRK3-207ENST00000594092 MPPED1O15442 326 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
VRK3-207ENST00000594092 ZNF273Q14593 569 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 LTC4SQ16873 150 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 Q5BKY6 102 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 METTL8Q9H825 291 aaKnown RBP12.53□□□□□ -0.4
VRK3-207ENST00000594092 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
VRK3-207ENST00000594092 C13orf42A0A1B0GVH6 325 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
VRK3-207ENST00000594092 WNT2P09544 360 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 OMGP23515 440 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 LOXL3P58215 753 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 FGL1Q08830 312 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 TMEM187Q14656 261 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 C9orf62Q8N4C0 152 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 OR8B3Q8NGG8 313 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 GRPEL2Q8TAA5 225 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 OR8B2Q96RD0 313 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 LPAR3Q9UBY5 353 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 TACC2O95359 2948 aa12.53□□□□□ -0.4
VRK3-207ENST00000594092 SPG11Q96JI7 2443 aa12.52□□□□□ -0.4
VRK3-207ENST00000594092 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.4
VRK3-207ENST00000594092 C3orf85A0A1B0GTC6 90 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 ADAP1O75689 374 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 CYCSP99999 105 aaKnown RBP12.52□□□□□ -0.41
VRK3-207ENST00000594092 SP6Q3SY56 376 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.41
VRK3-207ENST00000594092 BVESQ8NE79 360 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 OR8U1Q8NH10 309 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.41
VRK3-207ENST00000594092 AKR1E2Q96JD6 320 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
VRK3-207ENST00000594092 SNAPC5O75971 98 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 IFNA21P01568 189 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 HOXB5P09067 269 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 LAMTOR1Q6IAA8 161 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 LIAT1Q6ZQX7 453 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 LGI3Q8N145 548 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 NRGNQ92686 78 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 NMES1Q9C002 83 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 PATZ1Q9HBE1 687 aaKnown RBP12.51□□□□□ -0.41
VRK3-207ENST00000594092 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 KCNS2Q9ULS6 477 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
VRK3-207ENST00000594092 YPEL1O60688 119 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 CCL3L1P16619 93 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 SRPXP78539 464 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 MORN2Q502X0 79 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 WDR25Q64LD2 544 aaPredicted RBP12.51□□□□□ -0.41
VRK3-207ENST00000594092 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 ZNF714Q96N38 554 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 YPEL2Q96QA6 119 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 NARFLQ9H6Q4 476 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 GFOD1Q9NXC2 390 aa12.51□□□□□ -0.41
VRK3-207ENST00000594092 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 GPR37O15354 613 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 PGLYRP1O75594 196 aaPredicted RBP12.5□□□□□ -0.41
VRK3-207ENST00000594092 MMP23AO75900 390 aa12.5□□□□□ -0.41
VRK3-207ENST00000594092 IGLV2-14P01704 120 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms