RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RHCGQ9UBD6 479 aa2.01□□□□□ -2.09
VRK3-204ENST00000593912 SH3GLB1Q9Y371 365 aa2.01□□□□□ -2.09
VRK3-204ENST00000593912 MRPS16Q9Y3D3 137 aaKnown RBP2.01□□□□□ -2.09
VRK3-204ENST00000593912 YTHDF2Q9Y5A9 579 aaKnown RBP2.01□□□□□ -2.09
VRK3-204ENST00000593912 IGLV2-33A0A075B6J2 118 aaPredicted RBP2□□□□□ -2.09
VRK3-204ENST00000593912 IGHV3-49A0A0A0MS15 119 aa2□□□□□ -2.09
VRK3-204ENST00000593912 TRBV9A0A0B4J1U6 114 aa2□□□□□ -2.09
VRK3-204ENST00000593912 TRAV3A0A0B4J244 114 aa2□□□□□ -2.09
VRK3-204ENST00000593912 A0A0J9YXV3 536 aa2□□□□□ -2.09
VRK3-204ENST00000593912 FAM90A7PA6NKC0 464 aa2□□□□□ -2.09
VRK3-204ENST00000593912 FAM223BA6NKX1 122 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SMIM23A6NLE4 172 aa2□□□□□ -2.09
VRK3-204ENST00000593912 C15orf65H3BRN8 121 aa2□□□□□ -2.09
VRK3-204ENST00000593912 J3KTA2 159 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SLC22A1O15245 554 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SIVA1O15304 175 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SOCS1O15524 211 aa2□□□□□ -2.09
VRK3-204ENST00000593912 GSTP1P09211 210 aaKnown RBP2□□□□□ -2.09
VRK3-204ENST00000593912 H2BFMP0C1H6 154 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SPP1P10451 314 aa2□□□□□ -2.09
VRK3-204ENST00000593912 GCAP28676 217 aa2□□□□□ -2.09
VRK3-204ENST00000593912 OPRL1P41146 370 aa2□□□□□ -2.09
VRK3-204ENST00000593912 YAP1P46937 504 aaKnown RBP2□□□□□ -2.09
VRK3-204ENST00000593912 RPS6KA3P51812 740 aa2□□□□□ -2.09
VRK3-204ENST00000593912 HTD2P86397 168 aa2□□□□□ -2.09
VRK3-204ENST00000593912 RIPPLY1Q0D2K3 151 aa2□□□□□ -2.09
VRK3-204ENST00000593912 WFDC2Q14508 124 aa2□□□□□ -2.09
VRK3-204ENST00000593912 OXA1LQ15070 435 aa2□□□□□ -2.09
VRK3-204ENST00000593912 PRR4Q16378 134 aa2□□□□□ -2.09
VRK3-204ENST00000593912 PAN3Q58A45 887 aaKnown RBP2□□□□□ -2.09
VRK3-204ENST00000593912 CLVS2Q5SYC1 327 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SLC35F1Q5T1Q4 408 aa2□□□□□ -2.09
VRK3-204ENST00000593912 RSBN1Q5VWQ0 802 aaPredicted RBP2□□□□□ -2.09
VRK3-204ENST00000593912 TMEM42Q69YG0 159 aa2□□□□□ -2.09
VRK3-204ENST00000593912 C8orf82Q6P1X6 216 aaPredicted RBP2□□□□□ -2.09
VRK3-204ENST00000593912 TIFABQ6ZNK6 161 aa2□□□□□ -2.09
VRK3-204ENST00000593912 NFE4Q86UQ8 179 aa2□□□□□ -2.09
VRK3-204ENST00000593912 SERPINA12Q8IW75 414 aa2□□□□□ -2.09
VRK3-204ENST00000593912 FAM223AQ8IWN6 122 aa2□□□□□ -2.09
VRK3-204ENST00000593912 PRSS35Q8N3Z0 413 aa2□□□□□ -2.09
VRK3-204ENST00000593912 C8orf31Q8N9H6 132 aa2□□□□□ -2.09
VRK3-204ENST00000593912 C11orf65Q8NCR3 313 aa2□□□□□ -2.09
VRK3-204ENST00000593912 OR10A7Q8NGE5 316 aa2□□□□□ -2.09
VRK3-204ENST00000593912 OR51T1Q8NGJ9 327 aa2□□□□□ -2.09
VRK3-204ENST00000593912 RNF133Q8WVZ7 376 aa2□□□□□ -2.09
VRK3-204ENST00000593912 FCGR1BQ92637 280 aa2□□□□□ -2.09
VRK3-204ENST00000593912 GHSRQ92847 366 aa2□□□□□ -2.09
VRK3-204ENST00000593912 ARL11Q969Q4 196 aa2□□□□□ -2.09
VRK3-204ENST00000593912 LGALS12Q96DT0 336 aa2□□□□□ -2.09
VRK3-204ENST00000593912 GPX7Q96SL4 187 aaPredicted RBP2□□□□□ -2.09
VRK3-204ENST00000593912 RNF2Q99496 336 aa2□□□□□ -2.09
VRK3-204ENST00000593912 TEAD3Q99594 435 aa2□□□□□ -2.09
VRK3-204ENST00000593912 PHB2Q99623 299 aa2□□□□□ -2.09
VRK3-204ENST00000593912 ABHD6Q9BV23 337 aa2□□□□□ -2.09
VRK3-204ENST00000593912 ROPN1Q9HAT0 212 aaPredicted RBP2□□□□□ -2.09
VRK3-204ENST00000593912 HMG20AQ9NP66 347 aa2□□□□□ -2.09
VRK3-204ENST00000593912 GPR84Q9NQS5 396 aa2□□□□□ -2.09
VRK3-204ENST00000593912 ZNF581Q9P0T4 197 aa2□□□□□ -2.09
VRK3-204ENST00000593912 XCL2Q9UBD3 114 aa2□□□□□ -2.09
VRK3-204ENST00000593912 AASSQ9UDR5 926 aa2□□□□□ -2.09
VRK3-204ENST00000593912 AP3M1Q9Y2T2 418 aa2□□□□□ -2.09
VRK3-204ENST00000593912 ETV7Q9Y603 341 aa2□□□□□ -2.09
VRK3-204ENST00000593912 IGHV3OR16-13A0A075B7E8 117 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 IGHV3-74A0A0B4J1X5 117 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 IGKV1-12A0A0C4DH73 117 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 A0A0J9YY99 117 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 TEX48A0A1B0GUV7 120 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 A0A1W2PS18 150 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 TMEM189A5PLL7 270 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 LINC00473A8K010 186 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 M0QYG6 137 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 GSC2O15499 205 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 CCNKO75909 580 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 ZNF682O95780 498 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 IGKV1D-12P01611 117 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 APOC1P02654 83 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 CRYGBP07316 175 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 VIMP08670 466 aaKnown RBP1.99□□□□□ -2.09
VRK3-204ENST00000593912 OR9G9P0C7N8 305 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 DEFB130BP0DP73 79 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 DEFB130AP0DP74 79 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 MYOD1P15172 320 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 ZNF3P17036 446 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 PHBP35232 272 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 SLC18A1P54219 525 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 PSMA6P60900 246 aaKnown RBP1.99□□□□□ -2.09
VRK3-204ENST00000593912 LIPEQ05469 1076 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 KLF10Q13118 480 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 GNMTQ14749 295 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 UBE2V2Q15819 145 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 TMEM41BQ5BJD5 291 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 SPIN3Q5JUX0 258 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 FAM209BQ5JX69 171 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 LCN1P1Q5VSP4 162 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 ZNF730Q6ZMV8 503 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 DPY19L2P2Q6ZN68 376 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 LCA5Q86VQ0 697 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 IQCF1Q8N6M8 205 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 OR9I1Q8NGQ6 314 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 OR6N2Q8NGY6 317 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms