RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 JPT1Q9UK76 154 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 TRBV5-7A0A0A0MS05 114 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 SOX15O60248 233 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 SAP30O75446 220 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 MAS1P04201 325 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 FRMD6-AS1P0C7T7 363 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 SPNP16150 400 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 OR3A3P47888 321 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 ECSCRQ19T08 205 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 C19orf54Q5BKX5 351 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 FAM27D1Q5T7N8 215 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 ZNF833PQ6ZTB9 187 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 LYPD6Q86Y78 171 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 MINDY2Q8NBR6 621 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 Q96M66 194 aa12.65□□□□□ -0.38
LIG1-205ENST00000593425 DIMT1Q9UNQ2 313 aaKnown RBP12.65□□□□□ -0.38
LIG1-205ENST00000593425 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 A0A1W2PN81 502 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 FAM90A7PA6NKC0 464 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 FAM90A23PA8MXZ1 464 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 CA11O75493 328 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 CRTAPO75718 401 aaPredicted RBP12.64□□□□□ -0.39
LIG1-205ENST00000593425 NDUFA3O95167 84 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
LIG1-205ENST00000593425 FUT3P21217 361 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 CHRNA7P36544 502 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
LIG1-205ENST00000593425 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 ZNF485Q8NCK3 441 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 NPBQ8NG41 125 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 TPSG1Q9NRR2 321 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
LIG1-205ENST00000593425 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
LIG1-205ENST00000593425 STAB2Q8WWQ8 2551 aa12.64□□□□□ -0.39
LIG1-205ENST00000593425 IGHV4OR15-8A0A075B7B6 117 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 A0A087WW49 117 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 PNMA8CA0A1B0GUJ8 204 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 TRIM64CA6NLI5 447 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 YPEL1O60688 119 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 GLAP06280 429 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 GP9P14770 177 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 MYL12AP19105 171 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 C6orf141Q5SZD1 244 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 PQLC1Q8N2U9 271 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 YPEL2Q96QA6 119 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
LIG1-205ENST00000593425 SORL1Q92673 2214 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 LINC01619G3V211 115 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 PDCD6O75340 191 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
LIG1-205ENST00000593425 CRIP2P52943 208 aaPredicted RBP12.62□□□□□ -0.39
LIG1-205ENST00000593425 HTD2P86397 168 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 DOC2BQ14184 412 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 FAM131AQ6UXB0 335 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 ZNF554Q86TJ5 538 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 DERL3Q96Q80 235 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 CST11Q9H112 138 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 FBXL15Q9H469 300 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 S100A14Q9HCY8 104 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 SMPD3Q9NY59 655 aaPredicted RBP12.62□□□□□ -0.39
LIG1-205ENST00000593425 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
LIG1-205ENST00000593425 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
LIG1-205ENST00000593425 IRGMA1A4Y4 181 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 BAG2O95816 211 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 CAPGP40121 348 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 HMGN3Q15651 99 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 LRRC36Q1X8D7 754 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 CDH26Q8IXH8 852 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 TMEM80Q96HE8 168 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 SULT4A1Q9BR01 284 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 FOXA2Q9Y261 457 aaPredicted RBP12.61□□□□□ -0.39
LIG1-205ENST00000593425 A3GALT2U3KPV4 340 aa12.61□□□□□ -0.39
LIG1-205ENST00000593425 FCN1O00602 326 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 ST8SIA5O15466 376 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 RGS11O94810 467 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 EGR2P11161 476 aaPredicted RBP12.6□□□□□ -0.39
LIG1-205ENST00000593425 SNRPBP14678 240 aaKnown RBP12.6□□□□□ -0.39
LIG1-205ENST00000593425 CX3CL1P78423 397 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
LIG1-205ENST00000593425 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
LIG1-205ENST00000593425 GLDNQ6ZMI3 551 aaPredicted RBP12.6□□□□□ -0.39
LIG1-205ENST00000593425 HAPLN4Q86UW8 402 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 OR2AK2Q8NG84 335 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 GALMQ96C23 342 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
LIG1-205ENST00000593425 GAB2Q9UQC2 676 aa12.6□□□□□ -0.39
LIG1-205ENST00000593425 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms