RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 Q6ZS46 218 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 THNSL2Q86YJ6 484 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 SETD6Q8TBK2 473 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 TOMM40LQ969M1 308 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 RPEQ96AT9 228 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 BEX1Q9HBH7 125 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 C12orf4Q9NQ89 552 aa12.26□□□□□ -0.45
TRIM47-206ENST00000592942 CCDC59Q9P031 241 aaKnown RBP12.26□□□□□ -0.45
TRIM47-206ENST00000592942 A0A075B6Q4 140 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 A0A1B0GUS0 222 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF182P17025 639 aaPredicted RBP12.25□□□□□ -0.45
TRIM47-206ENST00000592942 BRS3P32247 399 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 RAB7AP51149 207 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 PROK1P58294 105 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 BLCAPP62952 87 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 HERPUD1Q15011 391 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 CCDC144NLQ6NUI1 221 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 MOB1BQ7L9L4 216 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 OR8H3Q8N146 312 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 DRAM1Q8N682 238 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 RBMXL1Q96E39 390 aaKnown RBP12.25□□□□□ -0.45
TRIM47-206ENST00000592942 PARP12Q9H0J9 701 aaKnown RBP12.25□□□□□ -0.45
TRIM47-206ENST00000592942 RHBDL2Q9NX52 303 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF230Q9UIE0 474 aaPredicted RBP12.25□□□□□ -0.45
TRIM47-206ENST00000592942 PITPNC1Q9UKF7 332 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 SPATA2Q9UM82 520 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 SIGLEC9Q9Y336 463 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 ETV7Q9Y603 341 aa12.25□□□□□ -0.45
TRIM47-206ENST00000592942 IGKV1D-8A0A087WSZ0 117 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 TRDCB7Z8K6 153 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 HSD17B6O14756 317 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 GAPDHP04406 335 aaKnown RBP12.24□□□□□ -0.45
TRIM47-206ENST00000592942 AMY1AP04745 511 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 AMY2AP04746 511 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 FCGR3AP08637 254 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 CD3GP09693 182 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 SOX6P35712 828 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 MNDAP41218 407 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 REG1BP48304 166 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 SRSF4Q08170 494 aaKnown RBP12.24□□□□□ -0.45
TRIM47-206ENST00000592942 EBI3Q14213 229 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 Q8N2B8 174 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 RTN4IP1Q8WWV3 396 aaPredicted RBP12.24□□□□□ -0.45
TRIM47-206ENST00000592942 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 RAB18Q9NP72 206 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 RNF114Q9Y508 228 aa12.24□□□□□ -0.45
TRIM47-206ENST00000592942 GSTT2P0CG29 244 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 GSTT2BP0CG30 244 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 SRSF7Q16629 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM47-206ENST00000592942 HACD4Q5VWC8 232 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 CAPSLQ8WWF8 208 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 AP3S1Q92572 193 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
TRIM47-206ENST00000592942 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 DCUN1D5Q9BTE7 237 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
TRIM47-206ENST00000592942 NXF2Q9GZY0 626 aaKnown RBP12.23□□□□□ -0.45
TRIM47-206ENST00000592942 TOLLIPQ9H0E2 274 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
TRIM47-206ENST00000592942 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF736B4DX44 427 aaPredicted RBP12.22□□□□□ -0.45
TRIM47-206ENST00000592942 ITGB1BP1O14713 200 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 SSX5O60225 188 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 PROP1O75360 226 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 OR2F2O95006 317 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
TRIM47-206ENST00000592942 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
TRIM47-206ENST00000592942 CEACAM6P40199 344 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 IGSF11Q5DX21 431 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 Q6ZS49 121 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 LYG1Q8N1E2 194 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 ACOT12Q8WYK0 555 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 ABHD14AQ9BUJ0 271 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 NPFFR1Q9GZQ6 430 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 C11orf54Q9H0W9 315 aaPredicted RBP12.22□□□□□ -0.45
TRIM47-206ENST00000592942 ABCG5Q9H222 651 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 SLC23A1Q9UHI7 598 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 A3GALT2U3KPV4 340 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 TRRAPQ9Y4A5 3859 aa12.22□□□□□ -0.45
TRIM47-206ENST00000592942 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.45
TRIM47-206ENST00000592942 TMEM235A6NFC5 223 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms