RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 PTHLHP12272 177 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 CT45A1Q5HYN5 189 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 SLC25A48Q6ZT89 311 aaKnown RBP16.78■□□□□ 0.28
DNMT1-227ENST00000592342 CT45A3Q8NHU0 189 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 ZFAND2BQ8WV99 257 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 TMEM158Q8WZ71 300 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 DCUN1D5Q9BTE7 237 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 CHIAQ9BZP6 476 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 C6orf62Q9GZU0 229 aaPredicted RBP16.78■□□□□ 0.28
DNMT1-227ENST00000592342 NDUFA13Q9P0J0 144 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 OR1A1Q9P1Q5 309 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 EXTL2Q9UBQ6 330 aa16.78■□□□□ 0.28
DNMT1-227ENST00000592342 LPLP06858 475 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 BRS3P32247 399 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 CBX5P45973 191 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 ZNF134P52741 427 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 LY6EQ16553 131 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 LY6G6FQ5SQ64 297 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 C16orf87Q6PH81 154 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 Q6ZS49 121 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 LYG1Q8N1E2 194 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 OR10J5Q8NHC4 309 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 EDARADDQ8WWZ3 215 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 GINS4Q9BRT9 223 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 VPREB3Q9UKI3 123 aa16.77■□□□□ 0.28
DNMT1-227ENST00000592342 ZFHX3Q15911 3703 aa16.77■□□□□ 0.27
DNMT1-227ENST00000592342 VGLL3A8MV65 326 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 LY6LH3BQJ8 138 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 CTDSP2O14595 271 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 HSD17B6O14756 317 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 CRYBA1P05813 215 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 PRSS3P35030 304 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 RAB7AP51149 207 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 RAB13P51153 203 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 IGSF11Q5DX21 431 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 SNX29P2Q8IUI4 249 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 MCFD2Q8NI22 146 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 FAM216AQ8WUB2 273 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 CABLES2Q9BTV7 478 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 IFT46Q9NQC8 304 aa16.76■□□□□ 0.27
DNMT1-227ENST00000592342 MXRA5Q9NR99 2828 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 IGKV1D-8A0A087WSZ0 117 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 IGKV1-6A0A0C4DH72 117 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 MEIS3P1A6NDR6 274 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 RNF212BA8MTL3 300 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 GAPDHP04406 335 aaKnown RBP16.75■□□□□ 0.27
DNMT1-227ENST00000592342 CTXN2P0C2S0 81 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 HERPUD1Q15011 391 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 KRTAP24-1Q3LI83 254 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 BEST4Q8NFU0 473 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 SLIRPQ9GZT3 109 aaKnown RBP16.75■□□□□ 0.27
DNMT1-227ENST00000592342 ANXA10Q9UJ72 324 aa16.75■□□□□ 0.27
DNMT1-227ENST00000592342 DPPA5A6NC42 116 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 ST8SIA5O15466 376 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 DIRAS3O95661 229 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 HLA-DQB1P01920 261 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 FCER2P06734 321 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 REG1BP48304 166 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 DYNLT3P51808 116 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 ARPC4P59998 168 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 ACTG1P63261 375 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 DIAPH2-AS1Q14236 149 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 KRTAP21-3Q3LHN1 58 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 HOGA1Q86XE5 327 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 LAX1Q8IWV1 398 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 GVQW1Q8N7I0 195 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 GCDHQ92947 438 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-227ENST00000592342 DGCR14Q96DF8 476 aaKnown RBP16.74■□□□□ 0.27
DNMT1-227ENST00000592342 RDH8Q9NYR8 311 aa16.74■□□□□ 0.27
DNMT1-227ENST00000592342 TRBV6-7A0A0A0MS04 114 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 GPR137BO60478 399 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 ZNF816Q0VGE8 651 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-227ENST00000592342 CNIH2Q6PI25 160 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 MOB3BQ86TA1 216 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 TGIF2LXQ8IUE1 241 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 OR8H3Q8N146 312 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-227ENST00000592342 C15orf40Q8WUR7 153 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 DIRAS2Q96HU8 199 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 MIXL1Q9H2W2 232 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 PIPOXQ9P0Z9 390 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 PITPNC1Q9UKF7 332 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 TCF19Q9Y242 345 aa16.73■□□□□ 0.27
DNMT1-227ENST00000592342 RBM7Q9Y580 266 aaKnown RBP16.73■□□□□ 0.27
DNMT1-227ENST00000592342 FAM181BA6NEQ2 426 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 ITGB1BP1O14713 200 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 TXNL1O43396 289 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 PIFOQ8TCI5 191 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 CAPSLQ8WWF8 208 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 PARP12Q9H0J9 701 aaKnown RBP16.72■□□□□ 0.27
DNMT1-227ENST00000592342 C11orf54Q9H0W9 315 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-227ENST00000592342 IFI27L2Q9H2X8 130 aa16.72■□□□□ 0.27
DNMT1-227ENST00000592342 IGHV1-3A0A0C4DH29 117 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 TIMM23O14925 209 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 RAB29O14966 203 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 CD24P25063 80 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 ZNF137PP52743 207 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 DHRS7BQ6IAN0 325 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-227ENST00000592342 LIAT1Q6ZQX7 453 aa16.71■□□□□ 0.27
DNMT1-227ENST00000592342 DRAM1Q8N682 238 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms