RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 MMP27Q9H306 513 aa13.06□□□□□ -0.32
CIRBP-233ENST00000591622 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
CIRBP-233ENST00000591622 TRRAPQ9Y4A5 3859 aa13.06□□□□□ -0.32
CIRBP-233ENST00000591622 A0A0B4J203 849 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-233ENST00000591622 SLC2A2P11168 524 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-233ENST00000591622 CD1BP29016 333 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 MOGAT2Q3SYC2 334 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 HIST2H2BDQ6DRA6 164 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 PTX4Q96A99 478 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 EAF1Q96JC9 268 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-233ENST00000591622 KCTD7Q96MP8 289 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 CMSS1Q9BQ75 279 aaKnown RBP13.05□□□□□ -0.32
CIRBP-233ENST00000591622 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 Q9N2K0 584 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 KCNK7Q9Y2U2 307 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 MGAM2Q2M2H8 2515 aa13.05□□□□□ -0.32
CIRBP-233ENST00000591622 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 RAB27BO00194 218 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 FGF16O43320 207 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 LANCL1O43813 399 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 FBXO24O75426 580 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 TNFAIP8O95379 198 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 TSPAN15O95858 294 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 CD28P10747 220 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 CD36P16671 472 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 GADD45AP24522 165 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 ODF3L1Q8IXM7 274 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 Q8N6K4 173 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 C5orf56Q8N8D9 126 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 OR2AK2Q8NG84 335 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 OR2T10Q8NGZ9 312 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 VWFP04275 2813 aa13.04□□□□□ -0.32
CIRBP-233ENST00000591622 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-233ENST00000591622 CSF1P09603 554 aa13.03□□□□□ -0.32
CIRBP-233ENST00000591622 SDC2P34741 201 aa13.03□□□□□ -0.32
CIRBP-233ENST00000591622 HLA-DRB3P79483 266 aa13.03□□□□□ -0.32
CIRBP-233ENST00000591622 MRPS15P82914 257 aaKnown RBP13.03□□□□□ -0.32
CIRBP-233ENST00000591622 CENPVQ7Z7K6 275 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-233ENST00000591622 TSPAN14Q8NG11 270 aa13.03□□□□□ -0.32
CIRBP-233ENST00000591622 MEGF8Q7Z7M0 2845 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 A0A087WXM4 84 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 LOC100506127A0A0U1RQW1 187 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 NCBP2LA6PVI3 153 aaKnown RBP13.02□□□□□ -0.33
CIRBP-233ENST00000591622 MFNGO00587 321 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 MOSP00540 346 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 SCTP09683 121 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 CD3GP09693 182 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 HIST1H1DP16402 221 aaKnown RBP13.02□□□□□ -0.33
CIRBP-233ENST00000591622 ZBTB25P24278 435 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 ZNF833PQ6ZTB9 187 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 CITED2Q99967 270 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-233ENST00000591622 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 IFI27L2Q9H2X8 130 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 SLC23A1Q9UHI7 598 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.33
CIRBP-233ENST00000591622 A0A075B6Q4 140 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 SAA2-SAA4A0A096LPE2 208 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 TRDCB7Z8K6 153 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 ITGB1BP1O14713 200 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 ST8SIA5O15466 376 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 SAA2P0DJI9 122 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-233ENST00000591622 GNB3P16520 340 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 CEACAM6P40199 344 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 OR3A3P47888 321 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 MXD1Q05195 221 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 LSAMPQ13449 338 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-233ENST00000591622 CENPOQ9BU64 300 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 PARP12Q9H0J9 701 aaKnown RBP13.01□□□□□ -0.33
CIRBP-233ENST00000591622 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 PLSCR3Q9NRY6 295 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 PIPOXQ9P0Z9 390 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 OR1A1Q9P1Q5 309 aa13.01□□□□□ -0.33
CIRBP-233ENST00000591622 SERPINE3A8MV23 424 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 HSPA12AO43301 675 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 FCGR3AP08637 254 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
CIRBP-233ENST00000591622 ARL6IP1Q15041 203 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 Q8N9W7 124 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 EDARADDQ8WWZ3 215 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 NABP2Q9BQ15 211 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 AGMATQ9BSE5 352 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 MRPL20Q9BYC9 149 aaKnown RBP13□□□□□ -0.33
CIRBP-233ENST00000591622 GHITMQ9H3K2 345 aa13□□□□□ -0.33
CIRBP-233ENST00000591622 LIN7CQ9NUP9 197 aaKnown RBP13□□□□□ -0.33
CIRBP-233ENST00000591622 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
CIRBP-233ENST00000591622 RAB29O14966 203 aa12.99□□□□□ -0.33
CIRBP-233ENST00000591622 IGHG2P01859 326 aa12.99□□□□□ -0.33
CIRBP-233ENST00000591622 CD83Q01151 205 aa12.99□□□□□ -0.33
CIRBP-233ENST00000591622 KIR2DS1Q14954 304 aa12.99□□□□□ -0.33
CIRBP-233ENST00000591622 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms