RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NHLRC3Q5JS37 347 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 TMEM69Q5SWH9 247 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 ASCL4Q6XD76 172 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 ZNF782Q6ZMW2 699 aaPredicted RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 GDPD3Q7L5L3 318 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 FAM185AQ8N0U4 392 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 BATF2Q8N1L9 274 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 ZNF561Q8N587 486 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 ANGPTL6Q8NI99 470 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 S100ZQ8WXG8 99 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RAB3CQ96E17 227 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 MALSU1Q96EH3 234 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 ZNF488Q96MN9 340 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 NABP2Q9BQ15 211 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 BARHL1Q9BZE3 327 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 PPP1R3EQ9H7J1 279 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 HEXA-AS1Q9H8Q6 139 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 CHMP1AQ9HD42 196 aaPredicted RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 C19orf73Q9NVV2 129 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RBFOX1Q9NWB1 397 aaKnown RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 MTCH1Q9NZJ7 389 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 MGAT4AQ9UM21 535 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 TBL2Q9Y4P3 447 aaKnown RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 PKD1P98161 4303 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 A0A1W2PR64 198 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 A0A1W2PRV1 198 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 SIRPB1O00241 398 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 GEMIN2O14893 280 aaKnown RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 ARG1P05089 322 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 GSTP1P09211 210 aaKnown RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 CCL3L1P16619 93 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 NDUFB7P17568 137 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 CNTFRP26992 372 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 PRDX2P32119 198 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 CBX5P45973 191 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 NPBWR2P48146 333 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 EDDM3BP56851 147 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ERVK11-1P61568 191 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 MRPS10P82664 201 aaKnown RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 FHL3Q13643 280 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 IL18Q14116 193 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ZNF146Q15072 292 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 GRK1Q15835 563 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 CNPY1Q3B7I2 92 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 PIGYQ3MUY2 71 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ZNF626Q68DY1 528 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 OR10K2Q6IF99 312 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 TRAT1Q6PIZ9 186 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 FAM131AQ6UXB0 335 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 LINC00299Q6ZSB3 139 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 MOB1BQ7L9L4 216 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 TRAPPC6BQ86SZ2 158 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 Q8N1Y9 231 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ZNRF1Q8ND25 227 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 OR10R2Q8NGX6 335 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 IL17DQ8TAD2 202 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 SNX22Q96L94 193 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 Q96M66 194 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 NOL4LQ96MY1 436 aaPredicted RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 GFI1Q99684 422 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 TM2D1Q9BX74 207 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 FGF23Q9GZV9 251 aaPredicted RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 ABCG5Q9H222 651 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 SEBOXQ9HB31 216 aaPredicted RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 HES4Q9HCC6 221 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 RETNQ9HD89 108 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 IFT46Q9NQC8 304 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ZFP57Q9NU63 452 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 ETAA1Q9NY74 926 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 KCNIP1Q9NZI2 227 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 EXTL2Q9UBQ6 330 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 MRPS7Q9Y2R9 242 aaKnown RBP4.75□□□□□ -1.65
VPS25-204ENST00000589577 HILPDAQ9Y5L2 63 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
VPS25-204ENST00000589577 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 IGKV1D-17A0A075B6S4 117 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TRAV18A0A075B6X5 111 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TRGV10A0A0A0MS01 117 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 A0A0B4J203 849 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 IGKV1-12A0A0C4DH73 117 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 A0A1W2PP11 408 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 hADV38S2A0JD32 116 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TMEM30CPA0ZSE6 113 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 FABP12A6NFH5 140 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 A8MZ25 164 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 HSPB6O14558 160 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 MGST3O14880 152 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 XRCC3O43542 346 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 HPGDSO60760 199 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TPPPO94811 219 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 OR2H2O95918 312 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 IGKV1D-12P01611 117 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 CD37P11049 281 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 PSG2P11465 335 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms