RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 FAM103A1Q9BTL3 118 aaKnown RBP13.68□□□□□ -0.22
CXXC1-211ENST00000589548 ERVK13-1Q9NX77 482 aa13.68□□□□□ -0.22
CXXC1-211ENST00000589548 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
CXXC1-211ENST00000589548 SNRPBP14678 240 aaKnown RBP13.67□□□□□ -0.22
CXXC1-211ENST00000589548 TPPP2P59282 170 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 MEDAGQ5VYS4 303 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 CD200R1LQ6Q8B3 271 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 TMEM106AQ96A25 262 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 TAF9BQ9HBM6 251 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 RAB9BQ9NP90 201 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 TMEM138Q9NPI0 162 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 ERGIC3Q9Y282 383 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 AP4S1Q9Y587 144 aa13.67□□□□□ -0.22
CXXC1-211ENST00000589548 SAC3D1A6NKF1 404 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 MCRIP1C9JLW8 97 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 RRHO14718 337 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 GTF2F2P13984 249 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 RAB40BQ12829 278 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 RAB12Q6IQ22 244 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 FAM131AQ6UXB0 335 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 IL34Q6ZMJ4 242 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 MRPL48Q96GC5 212 aaKnown RBP13.66□□□□□ -0.22
CXXC1-211ENST00000589548 CNOT2Q9NZN8 540 aaKnown RBP13.66□□□□□ -0.22
CXXC1-211ENST00000589548 PCLOQ9Y6V0 5065 aa13.66□□□□□ -0.22
CXXC1-211ENST00000589548 SC5DO75845 299 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 GABRB1P18505 474 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 MRPL28Q13084 256 aaKnown RBP13.65□□□□□ -0.22
CXXC1-211ENST00000589548 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 PPP1R27Q86WC6 154 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 GPR148Q8TDV2 347 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 ABHD5Q8WTS1 349 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 S100A13Q99584 98 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 TMED9Q9BVK6 235 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 HIPK2Q9H2X6 1198 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 IFI27L2Q9H2X8 130 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
CXXC1-211ENST00000589548 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
CXXC1-211ENST00000589548 JPT1Q9UK76 154 aa13.65□□□□□ -0.22
CXXC1-211ENST00000589548 ARPC1BO15143 372 aaKnown RBP13.64□□□□□ -0.23
CXXC1-211ENST00000589548 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-211ENST00000589548 RGS11O94810 467 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 CD2P06729 351 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 BDKRB2P30411 391 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 GBX2P52951 348 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-211ENST00000589548 PPP3R1P63098 170 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 SIGIRRQ6IA17 410 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 MRPL30Q8TCC3 161 aaKnown RBP13.64□□□□□ -0.23
CXXC1-211ENST00000589548 ZNF184Q99676 751 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-211ENST00000589548 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
CXXC1-211ENST00000589548 IZUMO1RA6ND01 250 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 RBMY1BA6NDE4 496 aaKnown RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 RBMY1EA6NEQ0 496 aaKnown RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 YPEL1O60688 119 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 TRGV3P03979 118 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 RBMY1DP0C7P1 496 aaKnown RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 FCGR1AP12314 374 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 IGFBP3P17936 291 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 TMEM267Q0VDI3 215 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 KLF5Q13887 457 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 AKIRIN2Q53H80 203 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 GLDNQ6ZMI3 551 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 OR13C5Q8NGS8 318 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 CENPNQ96H22 339 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-211ENST00000589548 RDH12Q96NR8 316 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 YPEL2Q96QA6 119 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 SLA2Q9H6Q3 261 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 TUBA4BQ9H853 241 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 GMPPBQ9Y5P6 360 aa13.63□□□□□ -0.23
CXXC1-211ENST00000589548 UBE2QL1A1L167 161 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 FADS2O95864 444 aaKnown RBP13.62□□□□□ -0.23
CXXC1-211ENST00000589548 MAS1P04201 325 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 ALPLP05186 524 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 HTD2P86397 168 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 PLGLAQ15195 96 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 ZIK1Q3SY52 487 aaPredicted RBP13.62□□□□□ -0.23
CXXC1-211ENST00000589548 OR52I1Q8NGK6 324 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 OR9G4Q8NGQ1 327 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 MUL1Q969V5 352 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 CLCC1Q96S66 551 aa13.62□□□□□ -0.23
CXXC1-211ENST00000589548 MYCBPQ99417 103 aaPredicted RBP13.62□□□□□ -0.23
CXXC1-211ENST00000589548 RANGRFQ9HD47 186 aaPredicted RBP13.62□□□□□ -0.23
CXXC1-211ENST00000589548 SNTNA6NMZ2 147 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 H0Y980 276 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 ST8SIA5O15466 376 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 CA11O75493 328 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 LIMS3P0CW19 117 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 LIMS4P0CW20 117 aa13.61□□□□□ -0.23
CXXC1-211ENST00000589548 CT45A6P0DMU7 189 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms