RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 DUX4L2P0CJ85 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L3P0CJ86 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L4P0CJ87 422 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L5P0CJ88 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L6P0CJ89 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L7P0CJ90 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RPS2P15880 293 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 SSTR5P35346 364 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RAB7AP51149 207 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RAP2BP61225 183 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 CYCSP99999 105 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 SLC9A3R2Q15599 337 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 C17orf58Q2M2W7 97 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 Q3ZCU0 254 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 MORN2Q502X0 79 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 PHLDA2Q53GA4 152 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4L9Q6RFH8 374 aaPredicted RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 LGI3Q8N145 548 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 OR8U1Q8NH10 309 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 UBALD1Q8TB05 177 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 IGFBPL1Q8WX77 278 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 OR2A7Q96R45 310 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 CCL19Q99731 98 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RANBP3Q9H6Z4 567 aaPredicted RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 PATZ1Q9HBE1 687 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RAB18Q9NP72 206 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 DUX4Q9UBX2 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 TANC2Q9HCD6 1990 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 SPTAN1Q13813 2472 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 IGKV1D-13A0A0B4J2D9 117 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 C3orf85A0A1B0GTC6 90 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 hCG_1809904A0A1W2PP81 198 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 A0A1W2PPE2 198 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 A0A1W2PR64 198 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 A0A1W2PRV1 198 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 HSD17B6O14756 317 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 PGLYRP1O75594 196 aaPredicted RBP8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 CLDN1O95832 211 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 IFNA21P01568 189 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 IGKV1-13P0DP09 117 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 CXCL3P19876 107 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 PDLIM4P50479 330 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 SUPT4H1P63272 117 aaKnown RBP8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 ZFP69Q49AA0 526 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 AVPI1Q5T686 147 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 TMEM200BQ69YZ2 307 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 GSG1LQ6UXU4 331 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 HEPN1Q6WQI6 88 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 ZNF818PQ6ZRF7 136 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 ZNF645Q8N7E2 425 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 TCTEX1D1Q8N7M0 179 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 DMRTB1Q96MA1 342 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 ZNF714Q96N38 554 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 GFOD1Q9NXC2 390 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 CTSZQ9UBR2 303 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 TEP1Q99973 2627 aaKnown RBP8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 DSCAMO60469 2012 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 ABCA4P78363 2273 aa8.68□□□□□ -1.02
CHMP1B-202ENST00000588284 A1L4Q6 167 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 A8MV72 311 aaPredicted RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 GOSR2O14653 212 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 PHF1O43189 567 aaPredicted RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 LY6HO94772 140 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 C1QBP02746 253 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 F2RP25116 425 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 SSTR2P30874 369 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 PPP1CCP36873 323 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 EIF2B2P49770 351 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 LOXL3P58215 753 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 SRSF4Q08170 494 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 TMEM187Q14656 261 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 LTC4SQ16873 150 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 WDR25Q64LD2 544 aaPredicted RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 ZNF841Q6ZN19 808 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 TBC1D26Q86UD7 250 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 FYTTD1Q96QD9 318 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 METTL8Q9H825 291 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 C19orf12Q9NSK7 152 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 RPUSD1Q9UJJ7 312 aaKnown RBP8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 KCNS2Q9ULS6 477 aa8.67□□□□□ -1.02
CHMP1B-202ENST00000588284 PKDREJQ9NTG1 2253 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 IGHV3-43A0A0B4J1X8 118 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 NDUFS8O00217 210 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 OR5AC1P0C628 307 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 IGHV3-43DP0DP04 118 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 NFYBP25208 207 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 DSCR9P59020 149 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 GNB2P62879 340 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 CD300CQ08708 224 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 FGL1Q08830 312 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 CATR1Q13166 79 aa8.66□□□□□ -1.02
CHMP1B-202ENST00000588284 GNMTQ14749 295 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms