RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CX3CL1P78423 397 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 RIPK1Q13546 671 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 LRRC36Q1X8D7 754 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 C1orf146Q5VVC0 180 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 RAB12Q6IQ22 244 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 MRPL30Q8TCC3 161 aaKnown RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 MRPL48Q96GC5 212 aaKnown RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 ETAA1Q9NY74 926 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 JPT1Q9UK76 154 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 TRAPPC2LQ9UL33 140 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 GAB2Q9UQC2 676 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 FOXA2Q9Y261 457 aaPredicted RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 MRPS28Q9Y2Q9 187 aaKnown RBP10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 NUBP2Q9Y5Y2 271 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 PCLOQ9Y6V0 5065 aa10.57□□□□□ -0.72
CLPTM1-208ENST00000588274 FCN1O00602 326 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 HSPA12AO43301 675 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 CD2P06729 351 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 FSTP19883 344 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 DOC2BQ14184 412 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 CCDC58Q4VC31 144 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 LY6G6FQ5SQ64 297 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 OR2G6Q5TZ20 316 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 LIN54Q6MZP7 749 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 RPL22L1Q6P5R6 122 aaKnown RBP10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 CD200R1LQ6Q8B3 271 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 IL34Q6ZMJ4 242 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 SMIM19Q96E16 107 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 Q96M66 194 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 RDH12Q96NR8 316 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 SPACA1Q9HBV2 294 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 OR2S2Q9NQN1 319 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 PAK1IP1Q9NWT1 392 aaPredicted RBP10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 KIAA1456Q9P272 454 aa10.56□□□□□ -0.72
CLPTM1-208ENST00000588274 SNTNA6NMZ2 147 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 OGG1O15527 345 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 ETV1P50549 477 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 PPP3R1P63098 170 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 SSBP2P81877 361 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 TRAT1Q6PIZ9 186 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 FAM131AQ6UXB0 335 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 STX19Q8N4C7 294 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF485Q8NCK3 441 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 PYDC1Q8WXC3 89 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 MUL1Q969V5 352 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 RHOVQ96L33 236 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 PGLYRP3Q96LB9 341 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 CST11Q9H112 138 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 FBXL15Q9H469 300 aa10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 FGF20Q9NP95 211 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 CHCHD3Q9NX63 227 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 NKX1-2Q9UD57 310 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-208ENST00000588274 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 MCRIP1C9JLW8 97 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 YPEL1O60688 119 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 CA11O75493 328 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 WBP4O75554 376 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 HTD2P86397 168 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 PITPNAQ00169 270 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 HMGN3Q15651 99 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 SMN1Q16637 294 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 HAGHQ16775 308 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 ZNF660Q6AZW8 331 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 FAM71F2Q6NXP2 309 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 CBR4Q8N4T8 237 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 TCTEX1D1Q8N7M0 179 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 MRPS24Q96EL2 167 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 YPEL2Q96QA6 119 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 OR14A2Q96R54 314 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 MYCBPQ99417 103 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 FAM103A1Q9BTL3 118 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 BANF2Q9H503 90 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 RAB9BQ9NP90 201 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 PEX16Q9Y5Y5 336 aa10.54□□□□□ -0.72
CLPTM1-208ENST00000588274 RRHO14718 337 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 MAS1P04201 325 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 CT45A6P0DMU7 189 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 CT45A5P0DMU8 189 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 CT45A7P0DMV0 189 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 MGMTP16455 207 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 DMKNQ6E0U4 476 aaPredicted RBP10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 GLIPR1L1Q6UWM5 242 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 GHITMQ9H3K2 345 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 STUB1Q9UNE7 303 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
CLPTM1-208ENST00000588274 UBE2QL1A1L167 161 aa10.52□□□□□ -0.73
CLPTM1-208ENST00000588274 H0YJW9 148 aa10.52□□□□□ -0.73
CLPTM1-208ENST00000588274 ST8SIA5O15466 376 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms