RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 YPEL1O60688 119 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 WBP4O75554 376 aaKnown RBP10.86□□□□□ -0.67
DNMT1-213ENST00000587604 NDUFA3O95167 84 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 SLURP1P55000 103 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 RPS11P62280 158 aaKnown RBP eCLIP10.86□□□□□ -0.67
DNMT1-213ENST00000587604 GNMTQ14749 295 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
DNMT1-213ENST00000587604 YIF1BQ5BJH7 314 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 ZNF660Q6AZW8 331 aaPredicted RBP10.86□□□□□ -0.67
DNMT1-213ENST00000587604 ACSM6Q6P461 480 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 ZNF833PQ6ZTB9 187 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 CDH26Q8IXH8 852 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 JAGN1Q8N5M9 183 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 OR6Q1Q8NGQ2 317 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 RDH12Q96NR8 316 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 YPEL2Q96QA6 119 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 CITED4Q96RK1 184 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 SELENOIQ9C0D9 397 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 CST11Q9H112 138 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 ALX4Q9H161 411 aaPredicted RBP10.86□□□□□ -0.67
DNMT1-213ENST00000587604 BANF2Q9H503 90 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 PALMDQ9NP74 551 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 KIAA1456Q9P272 454 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 CSMD3Q7Z407 3707 aa10.86□□□□□ -0.67
DNMT1-213ENST00000587604 UBE2QL1A1L167 161 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 SOX15O60248 233 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 RGS11O94810 467 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 LALBAP00709 142 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 LGALS1P09382 135 aaKnown RBP10.85□□□□□ -0.67
DNMT1-213ENST00000587604 OR8U9P0C7N5 309 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 MGMTP16455 207 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 FSTP19883 344 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 PPP1CCP36873 323 aaKnown RBP10.85□□□□□ -0.67
DNMT1-213ENST00000587604 CRIP2P52943 208 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-213ENST00000587604 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 C19orf54Q5BKX5 351 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 DMKNQ6E0U4 476 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-213ENST00000587604 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 FOXA2Q9Y261 457 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-213ENST00000587604 LRRC42Q9Y546 428 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 SACSQ9NZJ4 4579 aa10.85□□□□□ -0.67
DNMT1-213ENST00000587604 SAA2-SAA4A0A096LPE2 208 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 LCE6AA0A183 80 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 A0A1W2PN81 502 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 IRGMA1A4Y4 181 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 MAS1P04201 325 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 SAA2P0DJI9 122 aaPredicted RBP10.84□□□□□ -0.67
DNMT1-213ENST00000587604 MYL12AP19105 171 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 CHRNA7P36544 502 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 OR3A3P47888 321 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 NDPQ00604 133 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 C5orf24Q7Z6I8 188 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 MRPL30Q8TCC3 161 aaKnown RBP10.84□□□□□ -0.67
DNMT1-213ENST00000587604 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 GALMQ96C23 342 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 PGLYRP3Q96LB9 341 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 Q96M66 194 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 DIMT1Q9UNQ2 313 aaKnown RBP10.84□□□□□ -0.67
DNMT1-213ENST00000587604 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
DNMT1-213ENST00000587604 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 LYSTQ99698 3801 aa10.84□□□□□ -0.67
DNMT1-213ENST00000587604 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 A0A087WW49 117 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 A0A1W2PPK0 400 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 PDCD6O75340 191 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CRTAPO75718 401 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-213ENST00000587604 HSPB1P04792 205 aaKnown RBP10.83□□□□□ -0.68
DNMT1-213ENST00000587604 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CX3CL1P78423 397 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-213ENST00000587604 PYHIN1Q6K0P9 492 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CD200R1LQ6Q8B3 271 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 LYPD6Q86Y78 171 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 C10orf67Q8IYJ2 551 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 OR2AK2Q8NG84 335 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 FLYWCH2Q96CP2 140 aaKnown RBP10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 OR14A2Q96R54 314 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 OR4C12Q96R67 309 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 CLEC2DQ9UHP7 191 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 RNF150Q9ULK6 438 aa10.83□□□□□ -0.68
DNMT1-213ENST00000587604 RRHO14718 337 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 ARPC1BO15143 372 aaKnown RBP10.82□□□□□ -0.68
DNMT1-213ENST00000587604 LDLRAD4O15165 306 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 CAPGP40121 348 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 PITPNAQ00169 270 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 DOC2BQ14184 412 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 AKIRIN2Q53H80 203 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 C6orf141Q5SZD1 244 aa10.82□□□□□ -0.68
DNMT1-213ENST00000587604 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms