RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 GON7Q9BXV9 100 aa8.5□□□□□ -1.05
ZNF540-205ENST00000587220 IFT22Q9H7X7 185 aa8.5□□□□□ -1.05
ZNF540-205ENST00000587220 LINC00574Q9H8X3 128 aa8.5□□□□□ -1.05
ZNF540-205ENST00000587220 TSSC4Q9Y5U2 329 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-205ENST00000587220 SIRT4Q9Y6E7 314 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-205ENST00000587220 NPIPB11E5RHQ5 1161 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 SDCBPO00560 298 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-205ENST00000587220 HSD17B6O14756 317 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 PIN1P1O15428 100 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 LALBAP00709 142 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 CD1AP06126 327 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 SLC2A2P11168 524 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-205ENST00000587220 CD83Q01151 205 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 FABP5Q01469 135 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 HNF4GQ14541 408 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 PYDC2Q56P42 97 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 DMKNQ6E0U4 476 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-205ENST00000587220 NOXA1Q86UR1 476 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 OR8H3Q8N146 312 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 CCDC107Q8WV48 283 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 ARL11Q969Q4 196 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 OR14A2Q96R54 314 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 MARVELD1Q9BSK0 173 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 C11orf54Q9H0W9 315 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-205ENST00000587220 SPACA1Q9HBV2 294 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 RAB9BQ9NP90 201 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 DIABLOQ9NR28 239 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 NECAP2Q9NVZ3 263 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 ZNF581Q9P0T4 197 aa8.49□□□□□ -1.05
ZNF540-205ENST00000587220 MRPS28Q9Y2Q9 187 aaKnown RBP8.49□□□□□ -1.05
ZNF540-205ENST00000587220 A0A1W2PPE3 182 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 A0A1W2PPI3 338 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 PSMB11A5LHX3 300 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 MCRIP1C9JLW8 97 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 AIPO00170 330 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 PLA2G10O15496 165 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 ORC5O43913 435 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 IGKV1D-33P01593 117 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 IGKV1-33P01594 117 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 C1QBP02746 253 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 GAPDHP04406 335 aaKnown RBP8.48□□□□□ -1.05
ZNF540-205ENST00000587220 AMY1AP04745 511 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 AMY2AP04746 511 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 IGFBP3P17936 291 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-205ENST00000587220 IL3RAP26951 378 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 REG1BP48304 166 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 MRPS15P82914 257 aaKnown RBP8.48□□□□□ -1.05
ZNF540-205ENST00000587220 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 AWAT2Q6E213 333 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 CNIH2Q6PI25 160 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 MOB3BQ86TA1 216 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 THNSL2Q86YJ6 484 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 PHYHIPQ92561 330 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 PHF21AQ96BD5 680 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 CMTM3Q96MX0 182 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 TRAPPC2LQ9UL33 140 aa8.48□□□□□ -1.05
ZNF540-205ENST00000587220 TRAV8-7A0A075B6U6 113 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 TRBV5-5A0A0J9YX44 114 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 A0A1W2PP11 408 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 NCBP2LA6PVI3 153 aaKnown RBP8.47□□□□□ -1.05
ZNF540-205ENST00000587220 SERPINE3A8MV23 424 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 SPINT2O43291 252 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 LYRM1O43325 122 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 MAS1P04201 325 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 IGLL1P15814 213 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 CELP19835 753 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 FSTP19883 344 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 MAPK3P27361 379 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-205ENST00000587220 SLC35B1P78383 322 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 DIAPH2-AS1Q14236 149 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 TCTEX1D4Q5JR98 221 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 RAB12Q6IQ22 244 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 GLIPR1L1Q6UWM5 242 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 ZNF497Q6ZNH5 498 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 FOXRED2Q8IWF2 684 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 Q8N402 240 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 PRR18Q8N4B5 295 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 UBALD1Q8TB05 177 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 ZFAND1Q8TCF1 268 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 THRSPQ92748 146 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 MRPS24Q96EL2 167 aaKnown RBP8.47□□□□□ -1.05
ZNF540-205ENST00000587220 PGLYRP3Q96LB9 341 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 C7orf50Q9BRJ6 194 aaKnown RBP8.47□□□□□ -1.05
ZNF540-205ENST00000587220 COPZ2Q9P299 210 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 GNG12Q9UBI6 72 aa8.47□□□□□ -1.05
ZNF540-205ENST00000587220 NOTCH3Q9UM47 2321 aa8.46□□□□□ -1.05
ZNF540-205ENST00000587220 IGHV3-43A0A0B4J1X8 118 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 IGHV1-3A0A0C4DH29 117 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A18PA6NE21 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A16PA6NEW6 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A20PA6NIJ5 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A9PA6NNJ1 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A12PA8MX19 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FAM90A5PA8MXJ8 464 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 FGF16O43320 207 aa8.46□□□□□ -1.06
ZNF540-205ENST00000587220 CRTAPO75718 401 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms