RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ARL11Q969Q4 196 aa16.96■□□□□ 0.31
ATG4D-204ENST00000586417 GPHA2Q96T91 129 aa16.96■□□□□ 0.31
ATG4D-204ENST00000586417 METTL8Q9H825 291 aaKnown RBP16.96■□□□□ 0.31
ATG4D-204ENST00000586417 SIGLEC5O15389 551 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 FGL1Q08830 312 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 LHFPL5Q8TAF8 219 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 CCL17Q92583 94 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 C18orf12Q96KH6 178 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 GON7Q9BXV9 100 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 FAM234AQ9H0X4 552 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 SLA2Q9H6Q3 261 aa16.95■□□□□ 0.3
ATG4D-204ENST00000586417 FXYD6-FXYD2A0A087WZ82 144 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 TRAV38-1A0A0B4J264 116 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 PGLYRP1O75594 196 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-204ENST00000586417 LY6HO94772 140 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 SSTR2P30874 369 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 IL15RAQ13261 267 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 CMTM1Q8IZ96 169 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 TMEM222Q9H0R3 208 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 ANKRD17O75179 2603 aaKnown RBP16.94■□□□□ 0.3
ATG4D-204ENST00000586417 PPIAL4EA0A075B759 164 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 PPIAL4DF5H284 164 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 NDUFS7O75251 213 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 OR8U9P0C7N5 309 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 PPIAL4FP0DN26 164 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 CGB3P0DN86 165 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 CGB7P0DN87 165 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 SLC25A4P12235 298 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 GZMHP20718 246 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 EDDM3BP56851 147 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 HTD2P86397 168 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 CYCSP99999 105 aaKnown RBP16.94■□□□□ 0.3
ATG4D-204ENST00000586417 LRRC37A5PQ49AS3 106 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 GGNBP1Q5YKI7 109 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 C11orf87Q6NUJ2 197 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 LGI3Q8N145 548 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 OR8U1Q8NH10 309 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 RFESDQ8TAC1 157 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 C2orf50Q96LR7 162 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 COMMD9Q9P000 198 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 PPIAL4AQ9Y536 164 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 DSCAML1Q8TD84 2053 aa16.94■□□□□ 0.3
ATG4D-204ENST00000586417 OVOL3O00110 214 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 TNFRSF13BO14836 293 aaPredicted RBP16.93■□□□□ 0.3
ATG4D-204ENST00000586417 ARPC5O15511 151 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 SPINT2O43291 252 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 TNFSF12O43508 249 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 HEXA-AS1Q9H8Q6 139 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 VPS13CQ709C8 3753 aa16.93■□□□□ 0.3
ATG4D-204ENST00000586417 IGHV1-69-2A0A0G2JMI3 117 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 MPC2O95563 127 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 WNT2P09544 360 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 PPP1CCP36873 323 aaKnown RBP16.92■□□□□ 0.3
ATG4D-204ENST00000586417 TMEM65Q6PI78 240 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 AKR1E2Q96JD6 320 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 TMEM56Q96MV1 263 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 CCL19Q99731 98 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 OR6C3Q9NZP0 311 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 TMEM56-RWDD3S4R434 201 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 NKX6-3A6NJ46 265 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 UCP1P25874 307 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 PSMB6P28072 239 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 TCF23Q7RTU1 214 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 FGFRL1Q8N441 504 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 OR2S2Q9NQN1 319 aa16.92■□□□□ 0.3
ATG4D-204ENST00000586417 IGHV3-43A0A0B4J1X8 118 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 LYNX1G3V0Z9 82 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 H0Y980 276 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 L7N2F9 121 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 TMPRSS2O15393 492 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 FCN3O75636 299 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 SNAPC5O75971 98 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 IFNA21P01568 189 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 IGHV3-43DP0DP04 118 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 LYNX1P0DP58 116 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 F2RP25116 425 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 SRPXP78539 464 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 DRAM1Q8N682 238 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 NINJ1Q92982 152 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 RAB1BQ9H0U4 201 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 PAIP2BQ9ULR5 123 aaKnown RBP16.91■□□□□ 0.3
ATG4D-204ENST00000586417 UBE2J1Q9Y385 318 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-204ENST00000586417 RBM7Q9Y580 266 aaKnown RBP16.91■□□□□ 0.3
ATG4D-204ENST00000586417 ARID1AO14497 2285 aa16.91■□□□□ 0.3
ATG4D-204ENST00000586417 F2RL2O00254 374 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 CDS2O95674 445 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 RPA2P15927 270 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 IAH1Q2TAA2 248 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-204ENST00000586417 SLC35G3Q8N808 338 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 CALYQ9NYX4 217 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 KCNS2Q9ULS6 477 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 CSMD1Q96PZ7 3565 aa16.9■□□□□ 0.3
ATG4D-204ENST00000586417 H0YIZ8 118 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 TSC22D2O75157 780 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 S100GP29377 79 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 C17orf58Q2M2W7 97 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 TMEM268Q5VZI3 342 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 ZNF546Q86UE3 836 aa16.89■□□□□ 0.3
ATG4D-204ENST00000586417 ZNF645Q8N7E2 425 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms