RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 C12orf45Q8N5I9 185 aaPredicted RBP1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 MIR7-3HGQ8N6C7 128 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 PQLC3Q8N755 202 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM105Q8N8V8 129 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 OR8J3Q8NGG0 315 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 OR4A15Q8NGL6 344 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 SPPL2BQ8TCT7 592 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 AGR3Q8TD06 166 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 ASZ1Q8WWH4 475 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 ACOT12Q8WYK0 555 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 TCEAL4Q96EI5 215 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 CERS2Q96G23 380 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 OR52B2Q96RD2 323 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 VAT1Q99536 393 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 MRPL57Q9BQC6 102 aaKnown RBP1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 BBS2Q9BXC9 721 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 SRRQ9GZT4 340 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 GABARAPL1Q9H0R8 117 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 ALX4Q9H161 411 aaPredicted RBP1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 MED28Q9H204 178 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 ELOVL6Q9H5J4 265 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 XKR8Q9H6D3 395 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM185BQ9H7F4 350 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 MRPS30Q9NP92 439 aaKnown RBP1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 SDHAF2Q9NX18 166 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 BABAM2Q9NXR7 383 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 COA4Q9NYJ1 87 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 C21orf62Q9NYP8 219 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 CCDC167Q9P0B6 97 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 SCP2D1Q9UJQ7 156 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 V9GYQ6 96 aa1.9□□□□□ -2.11
RPRD1A-203ENST00000585879 NINQ8N4C6 2090 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 DOCK4Q8N1I0 1966 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NYNRINQ9P2P1 1898 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 A0A0J9YXV3 536 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM218A2RU14 115 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 HMSDA8MTL9 139 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF879B4DU55 563 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 C5orf58C9J3I9 102 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF670-ZNF695F2Z2N8 137 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 INMT-MINDY4F8WBC2 141 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TSTD3H0UI37 97 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NME4O00746 187 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PDCD5O14737 125 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 LYRM1O43325 122 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SGCEO43556 437 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TPST1O60507 370 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SLC19A2O60779 497 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 HTR1AP08908 422 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TSPAN19P0C672 248 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PIPP12273 146 aaPredicted RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 CYBAP13498 195 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PVALBP20472 110 aaPredicted RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 LCN1P31025 176 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 CA5AP35218 305 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 POLR2IP36954 125 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TGFBR2P37173 567 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RFC3P40938 356 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 UQCRFS1P47985 274 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PRLHRP49683 370 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RAB5CP51148 216 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RGS8P57771 180 aaPredicted RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TAS2R60P59551 318 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 AP3S2P59780 193 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TPI1P60174 286 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RAB2AP61019 212 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 EMX2Q04743 252 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF33AQ06730 810 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 BIKQ13323 160 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TAF1AQ15573 450 aaPredicted RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 HMGN3Q15651 99 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 IMPG1Q17R60 797 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PGGHGQ32M88 737 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 C1orf185Q5T7R7 199 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM236Q5W0B7 351 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NCBP2-AS2Q69YL0 99 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 GLYATQ6IB77 296 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SLC25A25Q6KCM7 469 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RPL13AP3Q6NVV1 102 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 FAM131AQ6UXB0 335 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NPSR1Q6W5P4 371 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 CLEC20AQ6ZU45 233 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 DEFB128Q7Z7B8 93 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 FUNDC1Q8IVP5 155 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PDZD9Q8IXQ8 264 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF567Q8N184 647 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM86AQ8N2M4 240 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 OR5T1Q8NG75 326 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 OR52K1Q8NGK4 314 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 OR2T4Q8NH00 348 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 ZNF675Q8TD23 568 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SFT2D1Q8WV19 159 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMBIM1Q969X1 311 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 MRPL48Q96GC5 212 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 CSPG4P5Q96PW8 444 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 GPR22Q99680 433 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 PITX2Q99697 317 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms