RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 WDR31Q8NA23 367 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 RBMXL1Q96E39 390 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 NKX6-2Q9C056 277 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 ENSAO43768 121 aaKnown RBP10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 HBG1P69891 147 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 HBG2P69892 147 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 PEA15Q15121 130 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 TESK1Q15569 626 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 PRR30Q53SZ7 412 aaPredicted RBP10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 CRIP3Q6Q6R5 217 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 EGLN1Q9GZT9 426 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 POMT1Q9Y6A1 747 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 FREM2Q5SZK8 3169 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 NCKAP5O14513 1909 aa10.52□□□□□ -0.72
SMARCA4-208ENST00000585799 UBE2L5PA0A1B0GUS4 154 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 OOEPA6NGQ2 149 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 MLNRO43193 412 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 S100A6P06703 90 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 PGA5P0DJD9 388 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 TMEM252Q8N6L7 170 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 RND1Q92730 232 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 FAM208BQ5VWN6 2430 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 IQCF6A8MYZ5 107 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 SYNGR2O43760 224 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 CDS2O95674 445 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 HLA-GP17693 338 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 F2RL1P55085 397 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 HERPUD1Q15011 391 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 ZNF474Q6S9Z5 364 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 DRAM1Q8N682 238 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 OR13A1Q8NGR1 328 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 SAV1Q9H4B6 383 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 RFNGQ9Y644 331 aa10.52□□□□□ -0.73
SMARCA4-208ENST00000585799 MFSD2BA6NFX1 497 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 HOXA1P49639 335 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 LINC00205P59089 165 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 RXFP4Q8TDU9 374 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 GALNT14Q96FL9 552 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 C19orf12Q9NSK7 152 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 GNG13Q9P2W3 67 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 PRSS44E7EML9 344 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 CLDN14O95500 239 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 ASCL4Q6XD76 172 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 MSI2Q96DH6 328 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 DMRTA2Q96SC8 542 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 S1PR3Q99500 378 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 NRIP2Q9BQI9 281 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 CLN8Q9UBY8 286 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 IGKV1-6A0A0C4DH72 117 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 SNAPINO95295 136 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 ATP6V0CP27449 155 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 WDR82Q6UXN9 313 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 LINC00596Q86U02 117 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 RBMXL3Q8N7X1 1067 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 RNF7Q9UBF6 113 aa10.51□□□□□ -0.73
SMARCA4-208ENST00000585799 MGAQ8IWI9 3026 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 NAPSAO96009 420 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 P2RY1P47900 373 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 UCP3P55916 312 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 PIGBOS1A0A0B4J2F0 54 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 DBX1A6NMT0 343 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 TM4SF5O14894 197 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 RPS2P15880 293 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 GUCA2BQ16661 112 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 TIMM23BQ5SRD1 257 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 PLSCR4Q9NRQ2 329 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 ACACBO00763 2458 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 TMEM218A2RU14 115 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 DFFBO76075 338 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 OR4A8P0C604 315 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 SFTA3P0C7M3 94 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 Q6ZS92 163 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 VKORC1L1Q8N0U8 176 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 RAXQ9Y2V3 346 aa10.5□□□□□ -0.73
SMARCA4-208ENST00000585799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.5□□□□□ -0.736e-7■■■□□ 18.5
SMARCA4-208ENST00000585799 ODAMA1E959 279 aa10.49□□□□□ -0.73
SMARCA4-208ENST00000585799 FOXI3A8MTJ6 420 aaPredicted RBP10.49□□□□□ -0.73
SMARCA4-208ENST00000585799 H0Y980 276 aa10.49□□□□□ -0.73
SMARCA4-208ENST00000585799 GUK1Q16774 197 aa10.49□□□□□ -0.73
SMARCA4-208ENST00000585799 MMP26Q9NRE1 261 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms