RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 BCL7BQ9BQE9 202 aa9.83□□□□□ -0.84
SS18-225ENST00000585121 SULT4A1Q9BR01 284 aa9.83□□□□□ -0.84
SS18-225ENST00000585121 RIMS4Q9H426 269 aaPredicted RBP9.83□□□□□ -0.84
SS18-225ENST00000585121 AK6Q9Y3D8 172 aaKnown RBP9.83□□□□□ -0.84
SS18-225ENST00000585121 CCDC160A6NGH7 325 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 PDCD5O14737 125 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 SLC31A2O15432 143 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 PF4P02776 101 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 PSMB9P28065 219 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 ZNF134P52741 427 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 ZNF137PP52743 207 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 SLC35B1P78383 322 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 UNC119Q13432 240 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 MORN2Q502X0 79 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 GPR107Q5VW38 600 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 FAM53AQ6NSI3 398 aaPredicted RBP9.82□□□□□ -0.84
SS18-225ENST00000585121 MOB1BQ7L9L4 216 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 OR52L2PQ8NGH6 319 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 RAB2BQ8WUD1 216 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 RASL11BQ9BPW5 248 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 ABHD14AQ9BUJ0 271 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 STEAP1Q9UHE8 339 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 NOTCH3Q9UM47 2321 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 ADARB2-AS1A8MUL3 147 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 G3V4G9 280 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 LANCL1O43813 399 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 YPEL1O60688 119 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 CD33P20138 364 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 PPP1CCP36873 323 aaKnown RBP9.82□□□□□ -0.84
SS18-225ENST00000585121 QRFPP83859 136 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 FABP5Q01469 135 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 OR2AK2Q8NG84 335 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 IL1F10Q8WWZ1 152 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 YIPF6Q96EC8 236 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 YPEL2Q96QA6 119 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 FUNDC2Q9BWH2 189 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 GON7Q9BXV9 100 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 KCNK15Q9H427 330 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 LIN7CQ9NUP9 197 aaKnown RBP9.82□□□□□ -0.84
SS18-225ENST00000585121 MGAT4AQ9UM21 535 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 V9GY05 133 aa9.82□□□□□ -0.84
SS18-225ENST00000585121 NOL3O60936 208 aaKnown RBP9.81□□□□□ -0.84
SS18-225ENST00000585121 IGHG2P01859 326 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 MYL9P24844 172 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 GNMTQ14749 295 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 HMGN3Q15651 99 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 CNPY1Q3B7I2 92 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 TCTEX1D4Q5JR98 221 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 LY6G6FQ5SQ64 297 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 SAMD5Q5TGI4 173 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 COMMD1Q8N668 190 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 OR51D1Q8NGF3 324 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 OR56B1Q8NGI3 324 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 FAM3DQ96BQ1 224 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 ISOC1Q96CN7 298 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 LPAR5Q9H1C0 372 aa9.81□□□□□ -0.84
SS18-225ENST00000585121 AP4M1O00189 453 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 SOCS1O15524 211 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 CD36P16671 472 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 VEGFCP49767 419 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 MRPS15P82914 257 aaKnown RBP9.8□□□□□ -0.84
SS18-225ENST00000585121 BEAN1Q3B7T3 259 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 ZNF329Q86UD4 541 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 FAM89BQ8N5H3 189 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 Q8N6K4 173 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
SS18-225ENST00000585121 S1PR3Q99500 378 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 GFI1Q99684 422 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 ABCG5Q9H222 651 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 HSF4Q9ULV5 492 aa9.8□□□□□ -0.84
SS18-225ENST00000585121 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 TRBV6-6A0A0A6YYG2 114 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 HSPA12AO43301 675 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 GABARAPO95166 117 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 NAPSAO96009 420 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 GPR12P47775 334 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 LSAMPQ13449 338 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 C2orf76Q3KRA6 126 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 TIMM50Q3ZCQ8 353 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 HES5Q5TA89 166 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 ZNF880Q6PDB4 577 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 C10orf99Q6UWK7 81 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 STPG2Q8N412 459 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 Q8N9W7 124 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 ZFP57Q9NU63 452 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 AK3Q9UIJ7 227 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 LINC00527Q9UJ94 153 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 RAB22AQ9UL26 194 aa9.79□□□□□ -0.84
SS18-225ENST00000585121 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
SS18-225ENST00000585121 SOX6P35712 828 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 CLDN12P56749 244 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 MMDQ15546 238 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 REC114Q7Z4M0 266 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 C5orf24Q7Z6I8 188 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 ARHGAP5-AS1Q96IT6 56 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms