RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 HSD17B12Q53GQ0 312 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 CT45A1Q5HYN5 189 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 C6orf141Q5SZD1 244 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 SIGIRRQ6IA17 410 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 FAM53AQ6NSI3 398 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-206ENST00000584112 TEX38Q6PEX7 206 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 OR2W3Q7Z3T1 314 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 Q8N9W7 124 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 CT45A3Q8NHU0 189 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 KCNG3Q8TAE7 436 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 S1PR3Q99500 378 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 ABHD14AQ9BUJ0 271 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 TMED9Q9BVK6 235 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 TMEM59Q9BXS4 323 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 OR2S2Q9NQN1 319 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 LINC00527Q9UJ94 153 aa8.75□□□□□ -1.01
CCDC47-206ENST00000584112 SRMP19623 302 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 HTR2CP28335 458 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 VHLP40337 213 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 ZNF134P52741 427 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 RPS27AP62979 156 aaKnown RBP8.74□□□□□ -1.01
CCDC47-206ENST00000584112 INSL4Q14641 139 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 MED22Q15528 200 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 MORN2Q502X0 79 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 LY6G6FQ5SQ64 297 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 FAM27D1Q5T7N8 215 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 ETV3LQ6ZN32 361 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 CEACAM19Q7Z692 300 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 KLHL30-AS1Q8NEE0 82 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 MRPL30Q8TCC3 161 aaKnown RBP8.74□□□□□ -1.01
CCDC47-206ENST00000584112 UFD1Q92890 307 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 GALMQ96C23 342 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 MCRIP2Q9BUT9 160 aaKnown RBP8.74□□□□□ -1.01
CCDC47-206ENST00000584112 ABRACLQ9P1F3 81 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 LSM2Q9Y333 95 aaKnown RBP8.74□□□□□ -1.01
CCDC47-206ENST00000584112 TPRKBQ9Y3C4 175 aa8.74□□□□□ -1.01
CCDC47-206ENST00000584112 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 YPEL1O60688 119 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 BPNT1O95861 308 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 CHATP28329 748 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 SOX6P35712 828 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 PPP1CCP36873 323 aaKnown RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 MYCNOSP40205 109 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 RANBP1P43487 201 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 LSAMPQ13449 338 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 FOXE3Q13461 319 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 DCTN2Q13561 401 aaKnown RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 TRAM1Q15629 374 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 C8orf86Q6ZUL3 223 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 MOB1BQ7L9L4 216 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 LRRTM1Q86UE6 522 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 ZNF695Q8IW36 515 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 FAM71E2Q8N5Q1 922 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 OR2AK2Q8NG84 335 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 OR6M1Q8NGM8 313 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 YPEL2Q96QA6 119 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 SULT4A1Q9BR01 284 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 TM2D1Q9BX74 207 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 PLSCR3Q9NRY6 295 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 ZMAT5Q9UDW3 170 aaKnown RBP8.73□□□□□ -1.01
CCDC47-206ENST00000584112 STEAP1Q9UHE8 339 aa8.73□□□□□ -1.01
CCDC47-206ENST00000584112 LINC01548A6NM66 108 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 ZNF736B4DX44 427 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-206ENST00000584112 ANKRD65E5RJM6 399 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 SLC22A1O15245 554 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 ELANEP08246 267 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 UCHL1P09936 223 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 OR5H8P0DN80 308 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 VDAC1P21796 283 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 PSMA1P25786 263 aaKnown RBP8.72□□□□□ -1.01
CCDC47-206ENST00000584112 AQP4P55087 323 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 IRF3Q14653 427 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 GNMTQ14749 295 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 MMDQ15546 238 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 HMGN3Q15651 99 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 LIPKQ5VXJ0 399 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 OR10K2Q6IF99 312 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 C6orf201Q7Z4U5 140 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 OR52L2PQ8NGH6 319 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 CHCHD6Q9BRQ6 235 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 URM1Q9BTM9 101 aaKnown RBP8.72□□□□□ -1.01
CCDC47-206ENST00000584112 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 VCX3BQ9H321 246 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 RIMS4Q9H426 269 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-206ENST00000584112 CHMP1AQ9HD42 196 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-206ENST00000584112 ISYNA1Q9NPH2 558 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 ZNF580Q9UK33 172 aa8.72□□□□□ -1.01
CCDC47-206ENST00000584112 TMEM14DPA8MWL7 114 aa8.71□□□□□ -1.02
CCDC47-206ENST00000584112 RGS10O43665 173 aa8.71□□□□□ -1.02
CCDC47-206ENST00000584112 ARL6IP5O75915 188 aa8.71□□□□□ -1.02
CCDC47-206ENST00000584112 IGHG4P01861 327 aa8.71□□□□□ -1.02
CCDC47-206ENST00000584112 RPLP1P05386 114 aaKnown RBP8.71□□□□□ -1.02
CCDC47-206ENST00000584112 CD37P11049 281 aa8.71□□□□□ -1.02
CCDC47-206ENST00000584112 MYF6P23409 242 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms