RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SPACA1Q9HBV2 294 aa12.41□□□□□ -0.42
SREBF1-221ENST00000583080 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
SREBF1-221ENST00000583080 CHCHD3Q9NX63 227 aaKnown RBP12.41□□□□□ -0.42
SREBF1-221ENST00000583080 GMPPBQ9Y5P6 360 aa12.41□□□□□ -0.42
SREBF1-221ENST00000583080 SAA2-SAA4A0A096LPE2 208 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 SAA2P0DJI9 122 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-221ENST00000583080 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-221ENST00000583080 IGFBP3P17936 291 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-221ENST00000583080 VEGFCP49767 419 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 TRAT1Q6PIZ9 186 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 LYPD6Q86Y78 171 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 PYDC1Q8WXC3 89 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 MUL1Q969V5 352 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 CST11Q9H112 138 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 FBXL15Q9H469 300 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 KIAA1456Q9P272 454 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 GAB2Q9UQC2 676 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 PEX16Q9Y5Y5 336 aa12.4□□□□□ -0.42
SREBF1-221ENST00000583080 TRAV8-7A0A075B6U6 113 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 A8MZ25 164 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 HSPA12AO43301 675 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 SC5DO75845 299 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 SNRPBP14678 240 aaKnown RBP12.39□□□□□ -0.43
SREBF1-221ENST00000583080 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 CX3CL1P78423 397 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 SIGIRRQ6IA17 410 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 RPL22L1Q6P5R6 122 aaKnown RBP12.39□□□□□ -0.43
SREBF1-221ENST00000583080 GLIPR1L1Q6UWM5 242 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 FAM131AQ6UXB0 335 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 MRPL30Q8TCC3 161 aaKnown RBP12.39□□□□□ -0.43
SREBF1-221ENST00000583080 APH1BQ8WW43 257 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
SREBF1-221ENST00000583080 RSRP1Q9BUV0 290 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 BANF2Q9H503 90 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
SREBF1-221ENST00000583080 JPT1Q9UK76 154 aa12.39□□□□□ -0.43
SREBF1-221ENST00000583080 FCN1O00602 326 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 HSPB1P04792 205 aaKnown RBP12.38□□□□□ -0.43
SREBF1-221ENST00000583080 CCDC58Q4VC31 144 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 ZNF660Q6AZW8 331 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-221ENST00000583080 SGPP2Q8IWX5 399 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 CBR4Q8N4T8 237 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 RHOXF1Q8NHV9 184 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 ABHD5Q8WTS1 349 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 IFI27L2Q9H2X8 130 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 STUB1Q9UNE7 303 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 NUBP2Q9Y5Y2 271 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
SREBF1-221ENST00000583080 PLECQ15149 4684 aaKnown RBP12.37□□□□□ -0.43
SREBF1-221ENST00000583080 TNCP24821 2201 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 TRBV5-5A0A0J9YX44 114 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 RRHO14718 337 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 LALBAP00709 142 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 MAS1P04201 325 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 ARSBP15848 533 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 ETV1P50549 477 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 TPPP2P59282 170 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 GPR176Q14439 515 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 HAGHQ16775 308 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 AWAT2Q6E213 333 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 GLDNQ6ZMI3 551 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-221ENST00000583080 JAGN1Q8N5M9 183 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 FLYWCH2Q96CP2 140 aaKnown RBP12.37□□□□□ -0.43
SREBF1-221ENST00000583080 SMIM19Q96E16 107 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 MRPS24Q96EL2 167 aaKnown RBP12.37□□□□□ -0.43
SREBF1-221ENST00000583080 Q96MT0 163 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 SELENOIQ9C0D9 397 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 MRPS18AQ9NVS2 196 aaKnown RBP12.37□□□□□ -0.43
SREBF1-221ENST00000583080 ERGIC3Q9Y282 383 aa12.37□□□□□ -0.43
SREBF1-221ENST00000583080 H3BNX3 289 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 YPEL1O60688 119 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 CA11O75493 328 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 MGMTP16455 207 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 PLGLAQ15195 96 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
SREBF1-221ENST00000583080 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 RPL39P5Q59GN2 51 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 CD200R1LQ6Q8B3 271 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 UNQ5815/PRO19632Q6UWF5 114 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 ANKRD13BQ86YJ7 626 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 RHOVQ96L33 236 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 Q96M66 194 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 RDH12Q96NR8 316 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 YPEL2Q96QA6 119 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 ELOVL1Q9BW60 279 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 RETNQ9HD89 108 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
SREBF1-221ENST00000583080 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
SREBF1-221ENST00000583080 A0A1W2PPK0 400 aa12.35□□□□□ -0.43
SREBF1-221ENST00000583080 OGG1O15527 345 aa12.35□□□□□ -0.43
SREBF1-221ENST00000583080 GPX5O75715 221 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms