RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TAS2R9Q9NYW1 312 aa2.04□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNF638Q14966 1978 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 RIMS1Q86UR5 1692 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 ABCA9Q8IUA7 1624 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 FANCAO15360 1455 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 DENND4BO75064 1496 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 ARHGAP35Q9NRY4 1499 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 CRB1P82279 1406 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 A8MWP6 167 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 F5H5T6 163 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 LIN7AO14910 233 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 CRTAPO75718 401 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 ASS1P00966 412 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 ADORA1P30542 326 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 FUSP35637 526 aaKnown RBP eCLIP2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 GTF2BQ00403 316 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 PSG4Q00888 419 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 OR10P1Q8NGE3 313 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 OR5AK3PQ8NH89 298 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 LRRC45Q96CN5 670 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 ATP6V1G3Q96LB4 118 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 UGT2B28Q9BY64 529 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 NDEL1Q9GZM8 345 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 SPACA1Q9HBV2 294 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 C1orf109Q9NX04 203 aa2.03□□□□□ -2.08
SMCHD1-205ENST00000581383 TRPM3Q9HCF6 1732 aaPredicted RBP2.03□□□□□ -2.09
SMCHD1-205ENST00000581383 CFAP43Q8NDM7 1665 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 HECW1Q76N89 1606 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 ARHGAP5Q13017 1502 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 SCAPERQ9BY12 1400 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 C17orf98A8MV24 154 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 F5H5K5 113 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 F8VZ95 297 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 M0QYV0 167 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 SYNGR1O43759 233 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 SCN2BO60939 215 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 CRYGDP07320 174 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 FBP1P09467 338 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 GZMHP20718 246 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 STC1P52823 247 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 PDGFRLQ15198 375 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 MAPK14Q16539 360 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 TRMT12Q53H54 448 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF322Q6U7Q0 402 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 SLC13A5Q86YT5 568 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 YIPF7Q8N8F6 280 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 PHOSPHO2Q8TCD6 241 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 TAMM41Q96BW9 452 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 STACQ99469 402 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 GTSF1LQ9H1H1 148 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 CHMP4BQ9H444 224 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 TMEM216Q9P0N5 145 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 MMACHCQ9Y4U1 282 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 MTCH2Q9Y6C9 303 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 HSPE1-MOB4S4R3N1 261 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 BCORL1Q5H9F3 1711 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 ABCA6Q8N139 1617 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 DIP2CQ9Y2E4 1556 aa2.02□□□□□ -2.09
SMCHD1-205ENST00000581383 EFCAB5A4FU69 1503 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ZMYM4Q5VZL5 1548 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 SYCP2Q9BX26 1530 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ARHGEF12Q9NZN5 1544 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 NEO1Q92859 1461 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 C9orf84Q5VXU9 1444 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 TRAPPC8Q9Y2L5 1435 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ATAD5Q96QE3 1844 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 COL18A1P39060 1754 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 MYO9BQ13459 2157 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 LOC102725191A0A1B0GVB3 256 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 DENRO43583 198 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 OR4A8P0C604 315 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ORM2P19652 201 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 FOXF1Q12946 379 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 C1DQ13901 141 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 PDK2Q15119 407 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF181Q2M3W8 571 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ZFAND2AQ8N6M9 145 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 DNAAF3Q8N9W5 541 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 OR5K1Q8NHB7 308 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF251Q9BRH9 671 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 TUBA4BQ9H853 241 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 CD300AQ9UGN4 299 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 ABCC1P33527 1531 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 MYO16Q9Y6X6 1858 aa2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 CHD2O14647 1828 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-205ENST00000581383 TROQ12816 1431 aaPredicted RBP2□□□□□ -2.09
SMCHD1-205ENST00000581383 TRPM6Q9BX84 2022 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 CASQ1P31415 396 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 PPP1CCP36873 323 aaKnown RBP2□□□□□ -2.09
SMCHD1-205ENST00000581383 SPIN4Q56A73 249 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 TIMM23BQ5SRD1 257 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 BLIDQ8IZY5 108 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF567Q8N184 647 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 TMEM75Q8N9X5 138 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 MED18Q9BUE0 208 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 CFAP45Q9UL16 551 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 SCML1Q9UN30 329 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF337Q9Y3M9 751 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 RICTORQ6R327 1708 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms