RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 C13orf42A0A1B0GVH6 325 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 F2RL2O00254 374 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 TNFSF12O43508 249 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 NDUFB3O43676 98 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 FCN3O75636 299 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 RP2O75695 350 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 LY6HO94772 140 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 CGB3P0DN86 165 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 CGB7P0DN87 165 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 HTD2P86397 168 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 C17orf58Q2M2W7 97 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 LAMTOR1Q6IAA8 161 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 TCF23Q7RTU1 214 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 CMTM1Q8IZ96 169 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 BVESQ8NE79 360 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 NEU4Q8WWR8 484 aaPredicted RBP8.71□□□□□ -1.02
SS18-217ENST00000580958 TP53RKQ96S44 253 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 METTL8Q9H825 291 aaKnown RBP8.71□□□□□ -1.02
SS18-217ENST00000580958 OR2S2Q9NQN1 319 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 CTSZQ9UBR2 303 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 RNF150Q9ULK6 438 aa8.71□□□□□ -1.02
SS18-217ENST00000580958 UBE2J1Q9Y385 318 aaPredicted RBP8.71□□□□□ -1.02
SS18-217ENST00000580958 TRAV14DV4A0A0A6YYC5 116 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 C3orf85A0A1B0GTC6 90 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 MPTX1A8MV57 137 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 PGLYRP1O75594 196 aaPredicted RBP8.7□□□□□ -1.02
SS18-217ENST00000580958 RGS11O94810 467 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 IGHV2-70P01814 119 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 S100GP29377 79 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 CDKN1AP38936 164 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 LRRC10Q5BKY1 277 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 AVPI1Q5T686 147 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 GGNBP1Q5YKI7 109 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 LGI3Q8N145 548 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 DRAM1Q8N682 238 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 LRTM2Q8N967 370 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 GLYATL2Q8WU03 294 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 CORO2AQ92828 525 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 MSI2Q96DH6 328 aaKnown RBP8.7□□□□□ -1.02
SS18-217ENST00000580958 C5orf30Q96GV9 206 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 AKR1E2Q96JD6 320 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 C18orf12Q96KH6 178 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 OR2D2Q9H210 308 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 C19orf12Q9NSK7 152 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 COMMD9Q9P000 198 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 GNG12Q9UBI6 72 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 JPT1Q9UK76 154 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 HSPB11Q9Y547 144 aa8.7□□□□□ -1.02
SS18-217ENST00000580958 ARHGAP32A7KAX9 2087 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 MALRD1Q5VYJ5 2156 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 FXYD6-FXYD2A0A087WZ82 144 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 KBTBD11-OT1A0A1B0GTJ5 212 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 hADV38S2A0JD32 116 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 ZNF729A6NN14 1252 aaPredicted RBP8.69□□□□□ -1.02
SS18-217ENST00000580958 DVL1O14640 695 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 NDUFA2O43678 99 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 DAOP14920 347 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 OMGP23515 440 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 MEF2CQ06413 473 aaPredicted RBP8.69□□□□□ -1.02
SS18-217ENST00000580958 ZNF273Q14593 569 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 SELENOHQ8IZQ5 122 aaKnown RBP8.69□□□□□ -1.02
SS18-217ENST00000580958 ZNF645Q8N7E2 425 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 OR51H1Q8NH63 302 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
SS18-217ENST00000580958 C2orf50Q96LR7 162 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 NMES1Q9C002 83 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 TMEM222Q9H0R3 208 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 RAB9BQ9NP90 201 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 IDI2-AS1Q9NZ38 188 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 KAAG1Q9UBP8 84 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 CLN8Q9UBY8 286 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 PSG11Q9UQ72 335 aa8.69□□□□□ -1.02
SS18-217ENST00000580958 KLF2Q9Y5W3 355 aaPredicted RBP8.69□□□□□ -1.02
SS18-217ENST00000580958 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
SS18-217ENST00000580958 H0Y980 276 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 PPIHO43447 177 aaKnown RBP8.68□□□□□ -1.02
SS18-217ENST00000580958 YPEL1O60688 119 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 IFNA21P01568 189 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 WNT2P09544 360 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 F2RP25116 425 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 NFYBP25208 207 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 UCP1P25874 307 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 LOXL3P58215 753 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 RPL31P62899 125 aaKnown RBP8.68□□□□□ -1.02
SS18-217ENST00000580958 SRPXP78539 464 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 MRPS11P82912 194 aaKnown RBP8.68□□□□□ -1.02
SS18-217ENST00000580958 SRSF1Q07955 248 aaKnown RBP eCLIP8.68□□□□□ -1.02
SS18-217ENST00000580958 LGALSLQ3ZCW2 172 aaPredicted RBP8.68□□□□□ -1.02
SS18-217ENST00000580958 LRRC37A5PQ49AS3 106 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 MORN2Q502X0 79 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 UTF1Q5T230 341 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 PRAMEF5Q5TYX0 476 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 TMEM268Q5VZI3 342 aa8.68□□□□□ -1.02
SS18-217ENST00000580958 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms