RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 MYF6P23409 242 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 HOXD3P31249 432 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 TPBGQ13641 420 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 HMGN3Q15651 99 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 ZNF695Q8IW36 515 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 RITA1Q96K30 269 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 DUX3Q96PT4 197 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 GFI1Q99684 422 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 GON7Q9BXV9 100 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 LRRC42Q9Y546 428 aa16.72■□□□□ 0.27
CSNK1D-215ENST00000580784 A0A0A6YYD4 124 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 K7EIL1 84 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 RGS10O43665 173 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 BLVRBP30043 206 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 SLC6A1P30531 599 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 SOX6P35712 828 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 MYCNOSP40205 109 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 OR3A3P47888 321 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 RPS25P62851 125 aaKnown RBP16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 P2RY14Q15391 338 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 OR6M1Q8NGM8 313 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 P2RX4Q99571 388 aa16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 MRPL20Q9BYC9 149 aaKnown RBP16.71■□□□□ 0.27
CSNK1D-215ENST00000580784 SOCS1O15524 211 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 RGS11O94810 467 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 BPNT1O95861 308 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 NAPSAO96009 420 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 SLC2A2P11168 524 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 LY6G6FQ5SQ64 297 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 IL1F10Q8WWZ1 152 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 NABP2Q9BQ15 211 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 CCDC90BQ9GZT6 254 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 LPAR5Q9H1C0 372 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 CHMP1AQ9HD42 196 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 ABRACLQ9P1F3 81 aa16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 AK6Q9Y3D8 172 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-215ENST00000580784 WI2-2373I1.2A0A1W2PRP0 233 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 RRP9O43818 475 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 CNTFRP26992 372 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 ACTBP60709 375 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 MMDQ15546 238 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 CXorf66Q5JRM2 361 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 ZNF880Q6PDB4 577 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 ZNF833PQ6ZTB9 187 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 SVOPQ8N4V2 548 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 OR2AK2Q8NG84 335 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 SETD6Q8TBK2 473 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 RAX2Q96IS3 184 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 ANKRD60Q9BZ19 345 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 ISYNA1Q9NPH2 558 aa16.69■□□□□ 0.26
CSNK1D-215ENST00000580784 SAA2-SAA4A0A096LPE2 208 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 SAA2P0DJI9 122 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 ARSBP15848 533 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 CPEP16870 476 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 CRHBPP24387 322 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 CFHR3Q02985 330 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 EGFEM1PQ0D2K5 195 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 FOXE3Q13461 319 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 HDHD3Q9BSH5 251 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 STEAP1Q9UHE8 339 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 ZNF107Q9UII5 783 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 AK3Q9UIJ7 227 aa16.68■□□□□ 0.26
CSNK1D-215ENST00000580784 CCL24O00175 119 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 SLC17A2O00624 439 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 ST8SIA5O15466 376 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 IGHG4P01861 327 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 IGF1P05019 195 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 ELANEP08246 267 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 VDAC1P21796 283 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 MAP2K4P45985 399 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 CDX1P47902 265 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 MLLT11Q13015 90 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 TRAM1Q15629 374 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 DEFB136Q30KP8 78 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 FAM89BQ8N5H3 189 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 RNF152Q8N8N0 203 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 URM1Q9BTM9 101 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 IFI27L2Q9H2X8 130 aa16.67■□□□□ 0.26
CSNK1D-215ENST00000580784 ARL6IP5O75915 188 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 FABP5Q01469 135 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 DEFB121Q5J5C9 76 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 PRSS48Q7RTY5 328 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 KCTD7Q96MP8 289 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 MGLLQ99685 303 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 ZNF251Q9BRH9 671 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 MCRIP2Q9BUT9 160 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 GPR61Q9BZJ8 451 aa16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 PARP12Q9H0J9 701 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-215ENST00000580784 FOXI3A8MTJ6 420 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 PSMA1P25786 263 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 CALRP27797 417 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 TMEM50BP56557 158 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 CLDN12P56749 244 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 RAB25P57735 213 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 KIR2DS1Q14954 304 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 RAB11BQ15907 218 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 DPF1Q92782 380 aa16.65■□□□□ 0.26
CSNK1D-215ENST00000580784 RIMS4Q9H426 269 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms