RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MCUBQ9NWR8 336 aa12.68□□□□□ -0.38
SS18-216ENST00000580751 NUBP2Q9Y5Y2 271 aa12.68□□□□□ -0.38
SS18-216ENST00000580751 C2CD3Q4AC94 2353 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 TRBV6-7A0A0A0MS04 114 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 SPINT2O43291 252 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 NDUFB6O95139 128 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 CGB3P0DN86 165 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 CGB7P0DN87 165 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 RCC1P18754 421 aaPredicted RBP12.67□□□□□ -0.38
SS18-216ENST00000580751 FPR2P25090 351 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 BTCP35070 178 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 SSTR5P35346 364 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 UBE2E1P51965 193 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 TSPAN5P62079 268 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 HTD2P86397 168 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 SURF2Q15527 256 aaPredicted RBP12.67□□□□□ -0.38
SS18-216ENST00000580751 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 PLET1Q6UQ28 207 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 C9orf139Q6ZV77 190 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 OR13D1Q8NGV5 346 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 TERB2Q8NHR7 220 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 CREB3L1Q96BA8 519 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 GALMQ96C23 342 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
SS18-216ENST00000580751 MS4A7Q9GZW8 240 aaPredicted RBP12.67□□□□□ -0.38
SS18-216ENST00000580751 TOLLIPQ9H0E2 274 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 EHFQ9NZC4 300 aa12.67□□□□□ -0.38
SS18-216ENST00000580751 IGKV1D-8A0A087WSZ0 117 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 TRAV39A0A0B4J263 110 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 C12orf77C9JDV5 145 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 M0QYG6 137 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 PMP2P02689 132 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 COX7A1P24310 79 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 DLX1P56177 255 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 KLRD1Q13241 179 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 PDZD9Q8IXQ8 264 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 OR4D10Q8NGI6 311 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 OR56B4Q8NH76 319 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 ARL11Q969Q4 196 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 CYYR1Q96J86 154 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 SLC6A7Q99884 636 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 TMEM133Q9H2Q1 129 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 ZNF69Q9UC07 566 aa12.66□□□□□ -0.38
SS18-216ENST00000580751 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 F2RL2O00254 374 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 TCRBP04435 133 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 SCTP09683 121 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 OMGP23515 440 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 ZBTB25P24278 435 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 UCP3P55916 312 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
SS18-216ENST00000580751 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
SS18-216ENST00000580751 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 LPCAT3Q6P1A2 487 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
SS18-216ENST00000580751 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 IDO2Q6ZQW0 420 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 PNKDQ8N490 385 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 ZDHHC22Q8N966 263 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 OR52M1Q8NGK5 317 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 OR10J5Q8NHC4 309 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 MAFIPQ8WZ33 124 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 JPT1Q9UK76 154 aa12.65□□□□□ -0.38
SS18-216ENST00000580751 A0A087X0M5 115 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 IGHV2-26A0A0B4J1V2 119 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 A0A1B0GX30 115 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 NPFFO15130 113 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 TUSC2O75896 110 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 MMP23AO75900 390 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 HBZP02008 142 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 NFYBP25208 207 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
SS18-216ENST00000580751 Q3ZCU0 254 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 MIDNQ504T8 468 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 RFESDQ8TAC1 157 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 GINS4Q9BRT9 223 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 SUCNR1Q9BXA5 334 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 CLEC7AQ9BXN2 247 aa12.64□□□□□ -0.39
SS18-216ENST00000580751 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 RGS11O94810 467 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 IFNA2P01563 188 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 CD34P28906 385 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms