RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 C17orf58Q2M2W7 97 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 TIMM50Q3ZCQ8 353 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 RAB12Q6IQ22 244 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 GPR141Q7Z602 305 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 OR13A1Q8NGR1 328 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 SULT4A1Q9BR01 284 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 CST11Q9H112 138 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 PEX16Q9Y5Y5 336 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 MEIKINA0A087WXM9 373 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 J3QR06 171 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 PDCD6O75340 191 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 MT-ND4P03905 459 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 FUT3P21217 361 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 RPL5P46777 297 aaKnown RBP10.58□□□□□ -0.72
TRAF4-214ENST00000580073 PAX5Q02548 391 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 PLAC9Q5JTB6 97 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 FAM53AQ6NSI3 398 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-214ENST00000580073 TEX38Q6PEX7 206 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 ETV3LQ6ZN32 361 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 ZNF497Q6ZNH5 498 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 C6orf201Q7Z4U5 140 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 GAPTQ8N292 157 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 OR8U1Q8NH10 309 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 FAAP24Q9BTP7 215 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 CALYQ9NYX4 217 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 IDI2-AS1Q9NZ38 188 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 KCNK7Q9Y2U2 307 aa10.58□□□□□ -0.72
TRAF4-214ENST00000580073 COL7A1Q02388 2944 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 A0A1W2PPI3 338 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-214ENST00000580073 AP4M1O00189 453 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 RAB27BO00194 218 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 IL3RAP26951 378 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-214ENST00000580073 SERPINB10P48595 397 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 VEGFCP49767 419 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 SPCS2Q15005 226 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 NKAPLQ5M9Q1 402 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 IDNKQ5T6J7 187 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 ZNF329Q86UD4 541 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-214ENST00000580073 ZNF695Q8IW36 515 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 STPG2Q8N412 459 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 DRAM1Q8N682 238 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 OR5M8Q8NGP6 311 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 LGALS14Q8TCE9 139 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 CCDC107Q8WV48 283 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 SLC25A38Q96DW6 304 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 RAB9BQ9NP90 201 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 RAB22AQ9UL26 194 aa10.57□□□□□ -0.72
TRAF4-214ENST00000580073 KMT2CQ8NEZ4 4911 aaKnown RBP10.57□□□□□ -0.72
TRAF4-214ENST00000580073 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 HSD17B6O14756 317 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 IGKV1D-33P01593 117 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 IGKV1-33P01594 117 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 IGHG2P01859 326 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 RAB25P57735 213 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 CXorf66Q5JRM2 361 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-214ENST00000580073 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 IZUMO1Q8IYV9 350 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 OR4K15Q8NH41 348 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 UBALD1Q8TB05 177 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 MRPL30Q8TCC3 161 aaKnown RBP10.56□□□□□ -0.72
TRAF4-214ENST00000580073 MRGPRDQ8TDS7 321 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 SLC25A46Q96AG3 418 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 ARHGAP5-AS1Q96IT6 56 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 P2RX4Q99571 388 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 HDHD3Q9BSH5 251 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-214ENST00000580073 PECRQ9BY49 303 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 LINC00574Q9H8X3 128 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 LIN7CQ9NUP9 197 aaKnown RBP10.56□□□□□ -0.72
TRAF4-214ENST00000580073 ELF5Q9UKW6 265 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-214ENST00000580073 CEPT1Q9Y6K0 416 aa10.56□□□□□ -0.72
TRAF4-214ENST00000580073 C15orf65H3BRN8 121 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 TXNL1O43396 289 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
TRAF4-214ENST00000580073 GLAP06280 429 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-214ENST00000580073 RAB6AP20340 208 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 GNG10P50151 68 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 ZNF816Q0VGE8 651 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-214ENST00000580073 TGIF2LXQ8IUE1 241 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 RFESDQ8TAC1 157 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 PTX4Q96A99 478 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 URM1Q9BTM9 101 aaKnown RBP10.55□□□□□ -0.72
TRAF4-214ENST00000580073 SPACA1Q9HBV2 294 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 ETAA1Q9NY74 926 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 SCOCQ9UIL1 159 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 U3KQK5 164 aa10.55□□□□□ -0.72
TRAF4-214ENST00000580073 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
TRAF4-214ENST00000580073 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
TRAF4-214ENST00000580073 OR5H8P0DN80 308 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms