RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 SH2D7A6NKC9 451 aaPredicted RBP15.59■□□□□ 0.09
SS18-209ENST00000578595 FOXI3A8MTJ6 420 aaPredicted RBP15.59■□□□□ 0.09
SS18-209ENST00000578595 GNB3P16520 340 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 LSM3P62310 102 aaKnown RBP15.59■□□□□ 0.09
SS18-209ENST00000578595 HTD2P86397 168 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 ARFRP1Q13795 201 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 IDNKQ5T6J7 187 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 ZNF439Q8NDP4 499 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 LGALS14Q8TCE9 139 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 RTN4IP1Q8WWV3 396 aaPredicted RBP15.59■□□□□ 0.09
SS18-209ENST00000578595 CITED1Q99966 193 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 MOB4Q9Y3A3 225 aa15.59■□□□□ 0.09
SS18-209ENST00000578595 M0QZ24 198 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 TXNL1O43396 289 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 AIREO43918 545 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 TALDO1P37837 337 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 ZNF134P52741 427 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 STEAP3Q658P3 488 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 Q6ZPA2 131 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 CFHR4Q92496 578 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 PHF21AQ96BD5 680 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 ZNF696Q9H7X3 374 aa15.58■□□□□ 0.08
SS18-209ENST00000578595 MGAM2Q2M2H8 2515 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 YPEL1O60688 119 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 HIST1H1DP16402 221 aaKnown RBP15.57■□□□□ 0.08
SS18-209ENST00000578595 HERPUD1Q15011 391 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 ZNF880Q6PDB4 577 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 Q6ZS46 218 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 THNSL2Q86YJ6 484 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 YPEL2Q96QA6 119 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 Q9N2K0 584 aa15.57■□□□□ 0.08
SS18-209ENST00000578595 TRBV6-6A0A0A6YYG2 114 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 M0QZK8 103 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 RAB27BO00194 218 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 ST8SIA5O15466 376 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 HIST2H2BDQ6DRA6 164 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 PTX4Q96A99 478 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 SERTAD4Q9NUC0 356 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 OR1A1Q9P1Q5 309 aa15.56■□□□□ 0.08
SS18-209ENST00000578595 FAM90A9PA6NNJ1 464 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 NCBP2LA6PVI3 153 aaKnown RBP15.55■□□□□ 0.08
SS18-209ENST00000578595 MFNGO00587 321 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 SCTP09683 121 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 ZBTB25P24278 435 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 TGFBR1P36897 503 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 Q8N2B8 174 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 OR2T10Q8NGZ9 312 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 MAFIPQ8WZ33 124 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 ST6GALNAC6Q969X2 333 aa15.55■□□□□ 0.08
SS18-209ENST00000578595 SAA2-SAA4A0A096LPE2 208 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 SERPINE3A8MV23 424 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 TRDCB7Z8K6 153 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 BET1O15155 118 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 FBXO24O75426 580 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 FCGR3AP08637 254 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 SAA2P0DJI9 122 aaPredicted RBP15.54■□□□□ 0.08
SS18-209ENST00000578595 CEACAM6P40199 344 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 OR3A3P47888 321 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 ARL6IP1Q15041 203 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 IZUMO1Q8IYV9 350 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 EDARADDQ8WWZ3 215 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 YIPF6Q96EC8 236 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 EAF1Q96JC9 268 aaPredicted RBP15.54■□□□□ 0.08
SS18-209ENST00000578595 MRPL20Q9BYC9 149 aaKnown RBP15.54■□□□□ 0.08
SS18-209ENST00000578595 RHBDL2Q9NX52 303 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 ZNF230Q9UIE0 474 aaPredicted RBP15.54■□□□□ 0.08
SS18-209ENST00000578595 KCNK7Q9Y2U2 307 aa15.54■□□□□ 0.08
SS18-209ENST00000578595 FABP7O15540 132 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 LANCL1O43813 399 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 SCGNO76038 276 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 ZNF137PP52743 207 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 KIR2DS1Q14954 304 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 C2orf68Q2NKX9 166 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 CDNFQ49AH0 187 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 PRR31Q5SQ13 230 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 TREML4Q6UXN2 200 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 S1PR3Q99500 378 aa15.53■□□□□ 0.08
SS18-209ENST00000578595 PARP12Q9H0J9 701 aaKnown RBP15.53■□□□□ 0.08
SS18-209ENST00000578595 ZNF736B4DX44 427 aaPredicted RBP15.52■□□□□ 0.08
SS18-209ENST00000578595 MOSP00540 346 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 CD1BP29016 333 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 GNG2P59768 71 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 LSAMPQ13449 338 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 CENPVQ7Z7K6 275 aaPredicted RBP15.52■□□□□ 0.08
SS18-209ENST00000578595 C5orf56Q8N8D9 126 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 OR5H6Q8NGV6 325 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 ABHD14BQ96IU4 210 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 IFI27L2Q9H2X8 130 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 PIPOXQ9P0Z9 390 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 ETV7Q9Y603 341 aa15.52■□□□□ 0.08
SS18-209ENST00000578595 PKD1L1Q8TDX9 2849 aa15.52■□□□□ 0.07
SS18-209ENST00000578595 TMEM235A6NFC5 223 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 AMY1AP04745 511 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 AMY2AP04746 511 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 SERPINB10P48595 397 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 NSUN5P1Q3KNT7 163 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 RPL39P5Q59GN2 51 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 KHDC1LQ5JSQ8 128 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 LY6G6FQ5SQ64 297 aa15.51■□□□□ 0.07
SS18-209ENST00000578595 ODF3L1Q8IXM7 274 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms