RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 C3orf36Q3SXR2 165 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 AVPI1Q5T686 147 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C1orf185Q5T7R7 199 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SLC25A24Q6NUK1 477 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGFL3Q6UXB1 125 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SEM1Q6ZVN7 128 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ZNF525Q8N782 197 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C15orf54Q8N8G6 183 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SCGB1C1Q8TD33 95 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MRGPRDQ8TDS7 321 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 LRRC29Q8WV35 223 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 NINJ1Q92982 152 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C5orf30Q96GV9 206 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ABHD14AQ9BUJ0 271 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SLC35B3Q9H1N7 401 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OR2D2Q9H210 308 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 HIPK2Q9H2X6 1198 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MSL2Q9HCI7 577 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 KCNJ16Q9NPI9 418 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 UFSP2Q9NUQ7 469 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 KIAA1456Q9P272 454 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MLXQ9UH92 298 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 FZR1Q9UM11 496 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SHANK1Q9Y566 2161 aa7.84□□□□□ -1.15
CDK5RAP3-208ENST00000578525 A0A1B0GV50 99 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RBFOX3A6NFN3 312 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 H3BP45 60 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PPIHO43447 177 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TSPAN9O75954 239 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PTBP3O95758 552 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 P0C879 139 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GABRA2P47869 451 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HBG1P69891 147 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HBG2P69892 147 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RUNX1Q01196 453 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PAX5Q02548 391 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TLE4Q04727 773 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ESPL1Q14674 2120 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 AWAT1Q58HT5 328 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KRBOX4Q5JUW0 171 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF506Q5JVG8 444 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SP5Q6BEB4 398 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF66Q6ZN08 573 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 Q6ZS92 163 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 HAPLN4Q86UW8 402 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FAM90A1Q86YD7 464 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CD177Q8N6Q3 437 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RXFP4Q8TDU9 374 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PSMG3Q9BT73 122 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PARD6GQ9BYG4 376 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 METRNQ9UJH8 293 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RNF150Q9ULK6 438 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 DNAJC13O75165 2243 aa7.83□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PTPRBP23467 1997 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TRAV1-1A0A0B4J248 108 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C7orf77A4D0Y5 90 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 COLCA2A8K830 154 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 M0R036 132 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 M0R1B8 84 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RAB29O14966 203 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GPR37O15354 613 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SPINT2O43291 252 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CRYABP02511 175 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TFF1P04155 84 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SNRNP70P08621 437 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SRP19P09132 144 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 METTL15P1P0C7V9 234 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FOLR2P14207 255 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 EGR1P18146 543 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PRDX2P32119 198 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GLIPR1P48060 266 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF83P51522 516 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RPL30P62888 115 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CCL20P78556 96 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ARL16Q0P5N6 197 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RHEBQ15382 184 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 LRRC75BQ2VPJ9 315 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 AKIRIN2Q53H80 203 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TIMM23BQ5SRD1 257 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CNTRLQ7Z7A1 2325 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FGFRL1Q8N441 504 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ZNF808Q8N4W9 903 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PPP1R35Q8TAP8 253 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TCTEX1D2Q8WW35 142 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RBMXL1Q96E39 390 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RBKSQ9H477 322 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TUBA4BQ9H853 241 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 UNKLQ9H9P5 680 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 WASF3Q9UPY6 502 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GPR179Q6PRD1 2367 aa7.82□□□□□ -1.16
CDK5RAP3-208ENST00000578525 AHCTF1Q8WYP5 2266 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C17orf98A8MV24 154 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 SRRM5B3KS81 715 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C15orf65H3BRN8 121 aa7.81□□□□□ -1.16
CDK5RAP3-208ENST00000578525 NDUFA2O43678 99 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms