RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 CEACAM3P40198 252 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 P2RY4P51582 365 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FLI1Q01543 452 aaPredicted RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 PRR27Q6MZM9 219 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 TMEM88Q6PEY1 159 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 DBX2Q6ZNG2 339 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 RTN4RL2Q86UN3 420 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 TGIF2LYQ8IUE0 185 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 TGIF2LXQ8IUE1 241 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 ADTRPQ96IZ2 230 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 HARBI1Q96MB7 349 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 LINC00052Q96N35 136 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 PNRC2Q9NPJ4 139 aaKnown RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 HSF4Q9ULV5 492 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 PRELID1Q9Y255 219 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 MUC22E2RYF6 1773 aaPredicted RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A10PA6NDY2 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A18PA6NE21 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A16PA6NEW6 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A20PA6NIJ5 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A8PA6NJQ4 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A7PA6NKC0 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 ZNF785A8K8V0 405 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A22PA8MWA6 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A12PA8MX19 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A5PA8MXJ8 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 CDRT15L2A8MXV6 281 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A23PA8MXZ1 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 F2RL2O00254 374 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 MFNGO00587 321 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 RAB29O14966 203 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A15PP0C7V4 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A13PP0C7W8 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A14PP0C7W9 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 FAM90A24PP0C7X0 464 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 HKR1P10072 659 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 ORM2P19652 201 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 SRP14P37108 136 aaKnown RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 PLAURQ03405 335 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 PRB3Q04118 309 aaPredicted RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 PSG7Q13046 419 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 TMEM41BQ5BJD5 291 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 Q5BKY6 102 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 SPNS3Q6ZMD2 512 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 GCSAMQ8N6F7 178 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 NEIL1Q96FI4 390 aaPredicted RBP3.96□□□□□ -1.78
NF1-218ENST00000577967 TM2D1Q9BX74 207 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 ASCL3Q9NQ33 180 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
NF1-218ENST00000577967 IGKV1-9A0A0C4DH69 117 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 C7orf66A4D0T2 115 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 MBPP02686 304 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 CSN1S1P47710 185 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 TMEM187Q14656 261 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 ETFRF1Q6IPR1 90 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 RNF144BQ7Z419 303 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 WDFY1Q8IWB7 410 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 SSMEM1Q8WWF3 244 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 GPR146Q96CH1 333 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 SAT2Q96F10 170 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 RASL11BQ9BPW5 248 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 NUDT16L1Q9BRJ7 211 aaKnown RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 TMEM222Q9H0R3 208 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 TUBG2Q9NRH3 451 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 LPAR3Q9UBY5 353 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 IQCF6A8MYZ5 107 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 PITX3O75364 302 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 HPRT1P00492 218 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 H2BFSP57053 126 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 RPL39P5Q59GN2 51 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 ZBTB34Q8NCN2 500 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 TMEM171Q8WVE6 324 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 TP53RKQ96S44 253 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 SMIM7Q9BQ49 75 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 DCTN5Q9BTE1 182 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 GP6Q9HCN6 339 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 CACFD1Q9UGQ2 172 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 MAP1LC3B2A6NCE7 125 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 H0Y8G0 127 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 ZP1P60852 638 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 IZUMO4Q1ZYL8 232 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 NRN1LQ496H8 165 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 PDZD11Q5EBL8 140 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 RNFT1Q5M7Z0 435 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 C1orf162Q8NEQ5 155 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 WBP1Q96G27 269 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 REPIN1Q9BWE0 567 aaKnown RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 MAP1LC3BQ9GZQ8 125 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 OR51I2Q9H344 312 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 PROK2Q9HC23 129 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 NPDC1Q9NQX5 325 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 ZNF705GA8MUZ8 300 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 CA11O75493 328 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 S1PR2O95136 353 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 CCL1P22362 96 aa3.95□□□□□ -1.78
NF1-218ENST00000577967 CDC34P49427 236 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 USF2Q15853 346 aaPredicted RBP3.95□□□□□ -1.78
NF1-218ENST00000577967 CXorf66Q5JRM2 361 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms