RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 REG1BP48304 166 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 GNMTQ14749 295 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 NEDD8Q15843 81 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 C2orf68Q2NKX9 166 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 ODF3L1Q8IXM7 274 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 OR10R2Q8NGX6 335 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 EAF1Q96JC9 268 aaPredicted RBP11.11□□□□□ -0.63
GGA3-203ENST00000577435 HDHD3Q9BSH5 251 aaPredicted RBP11.11□□□□□ -0.63
GGA3-203ENST00000577435 ABHD14AQ9BUJ0 271 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 MMP27Q9H306 513 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 C12orf4Q9NQ89 552 aa11.11□□□□□ -0.63
GGA3-203ENST00000577435 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 A0A087WXM4 84 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 A0A0B4J203 849 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 SERPINE3A8MV23 424 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 PEX14O75381 377 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 TNFAIP8O95379 198 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 SLC2A2P11168 524 aaPredicted RBP11.1□□□□□ -0.63
GGA3-203ENST00000577435 GADD45AP24522 165 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 HES1Q14469 280 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 HNF4GQ14541 408 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 MOGAT2Q3SYC2 334 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
GGA3-203ENST00000577435 LYG1Q8N1E2 194 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 SETD6Q8TBK2 473 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 CHCHD6Q9BRQ6 235 aa11.1□□□□□ -0.63
GGA3-203ENST00000577435 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
GGA3-203ENST00000577435 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 MFNGO00587 321 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 TMEM127O75204 238 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 FBXO24O75426 580 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 MOSP00540 346 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 CD3GP09693 182 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 HIST1H1DP16402 221 aaKnown RBP11.09□□□□□ -0.63
GGA3-203ENST00000577435 ZBTB25P24278 435 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 SDC2P34741 201 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 SCAND1P57086 179 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 ARL6IP1Q15041 203 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 ZNF833PQ6ZTB9 187 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 TOLLIPQ9H0E2 274 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 PLSCR3Q9NRY6 295 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 PIPOXQ9P0Z9 390 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 SLC23A1Q9UHI7 598 aa11.09□□□□□ -0.63
GGA3-203ENST00000577435 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
GGA3-203ENST00000577435 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 DIRAS3O95661 229 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 CSF1P09603 554 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 SCTP09683 121 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 CD28P10747 220 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 CEACAM6P40199 344 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 MRPS15P82914 257 aaKnown RBP11.08□□□□□ -0.64
GGA3-203ENST00000577435 CD83Q01151 205 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 LSAMPQ13449 338 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
GGA3-203ENST00000577435 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
GGA3-203ENST00000577435 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 CENPOQ9BU64 300 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 RNF167Q9H6Y7 350 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 VCX3AQ9NNX9 186 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 DAPK2Q9UIK4 370 aa11.08□□□□□ -0.64
GGA3-203ENST00000577435 IGKV1-6A0A0C4DH72 117 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 LOC100506127A0A0U1RQW1 187 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 SMIM30A4D0T7 59 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
GGA3-203ENST00000577435 RAB29O14966 203 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 PLXNB1O43157 2135 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 SCGNO76038 276 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 IGHG2P01859 326 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 GNB3P16520 340 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 Q6ZS49 121 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 Q8N9W7 124 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 OR4A4PQ8NGN8 299 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 ZNF251Q9BRH9 671 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 C11orf54Q9H0W9 315 aaPredicted RBP11.07□□□□□ -0.64
GGA3-203ENST00000577435 ATG5Q9H1Y0 275 aa11.07□□□□□ -0.64
GGA3-203ENST00000577435 LIN7CQ9NUP9 197 aaKnown RBP11.07□□□□□ -0.64
GGA3-203ENST00000577435 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms