RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SIRT4Q9Y6E7 314 aaPredicted RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 HSPE1-MOB4S4R3N1 261 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 KIAA2026Q5HYC2 2103 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 IGHV3-43A0A0B4J1X8 118 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 A0A1W2PP11 408 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 TMEM212A6NML5 194 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 OOSP1A8MZH6 123 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 ZNF736B4DX44 427 aaPredicted RBP4.89□□□□□ -1.63
NUP88-212ENST00000576708 SLC31A2O15432 143 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 NXPH3O95157 252 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 IL1AP01583 271 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 LIMS3P0CW19 117 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 LIMS4P0CW20 117 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 IGHV3-43DP0DP04 118 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 RAB3AP20336 220 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 C21orf33P30042 268 aaPredicted RBP4.89□□□□□ -1.63
NUP88-212ENST00000576708 THBS3P49746 956 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 ARHGDIBP52566 201 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 RPL23AP62750 156 aaKnown RBP4.89□□□□□ -1.63
NUP88-212ENST00000576708 VAMP2P63027 116 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 RSU1Q15404 277 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 VAX1Q5SQQ9 334 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 CCDC144NLQ6NUI1 221 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 ASCL4Q6XD76 172 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 OR2W3Q7Z3T1 314 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 MOB3BQ86TA1 216 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 SYS1Q8N2H4 156 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 ZNF565Q8N9K5 539 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 PXT1Q8NFP0 134 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 RHOXF1Q8NHV9 184 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 APH1BQ8WW43 257 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 CREB3L1Q96BA8 519 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 DPCDQ9BVM2 203 aaPredicted RBP4.89□□□□□ -1.63
NUP88-212ENST00000576708 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 RHOFQ9HBH0 211 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 FKBP14Q9NWM8 211 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 ST3GAL6Q9Y274 331 aa4.89□□□□□ -1.63
NUP88-212ENST00000576708 IGHV1-3A0A0C4DH29 117 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 LOC100130705A0A1B0GUX0 176 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 MAGEA13PA6NCF6 341 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 SNTNA6NMZ2 147 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 C15orf65H3BRN8 121 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 M0QZK8 103 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 AP4M1O00189 453 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 HSD17B6O14756 317 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 GEMIN2O14893 280 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 WBP4O75554 376 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 OR7C1O76099 320 aaPredicted RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 FADS2O95864 444 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 LALBAP00709 142 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 IGHG2P01859 326 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 SERPINA2P20848 420 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 TAGLN2P37802 199 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 RBM11P57052 281 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 RAB25P57735 213 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 EGFEM1PQ0D2K5 195 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 RAB40BQ12829 278 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 MADCAM1Q13477 382 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 IL13RA2Q14627 380 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 DEFB136Q30KP8 78 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 PLAC9Q5JTB6 97 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 ATAD3CQ5T2N8 411 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 DDI2Q5TDH0 399 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 SLC35E3Q7Z769 313 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 ZFP41Q8N8Y5 198 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 KLHL30-AS1Q8NEE0 82 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 OR10X1Q8NGY0 326 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 OR52N1Q8NH53 320 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 CHPT1Q8WUD6 406 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 ARL11Q969Q4 196 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 MRPL48Q96GC5 212 aaKnown RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 LINC00574Q9H8X3 128 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 SLC35D1Q9NTN3 355 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 FAM118AQ9NWS6 357 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 CLEC2DQ9UHP7 191 aa4.88□□□□□ -1.63
NUP88-212ENST00000576708 AMMECR1Q9Y4X0 333 aaPredicted RBP4.88□□□□□ -1.63
NUP88-212ENST00000576708 TRAV8-7A0A075B6U6 113 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 A0A1W2PPK0 400 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 TMEM30CPA0ZSE6 113 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 XKRY2A2RUG3 117 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 NCBP2LA6PVI3 153 aaKnown RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 H0YIZ8 118 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 CCRL2O00421 344 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 SDCBPO00560 298 aaPredicted RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 FGF16O43320 207 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 CLIC3O95833 236 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 MT-ND4P03905 459 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 GAPDHP04406 335 aaKnown RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 BDKRB2P30411 391 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 ZNF93P35789 620 aaPredicted RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 MYCNOSP40205 109 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 VHLP40337 213 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 GPR12P47775 334 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 RAB7AP51149 207 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 LUMP51884 338 aaPredicted RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 ZNF816Q0VGE8 651 aaPredicted RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 EBI3Q14213 229 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms