RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 IMPAD1Q9NX62 359 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 ETAA1Q9NY74 926 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 SIGLEC8Q9NYZ4 499 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 CNOT2Q9NZN8 540 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 JPT1Q9UK76 154 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 A3GALT2U3KPV4 340 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 HECTD4Q9Y4D8 3996 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 SHISA3A0PJX4 238 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 H3BUA1 57 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 RRHO14718 337 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 RBBP9O75884 186 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 CNIH1O95406 144 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 FADS2O95864 444 aaKnown RBP6.87□□□□□ -1.31
SMG6-218ENST00000575454 TRGV3P03979 118 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 GLAP06280 429 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 T-ENOLP0DO92 83 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 FASP25445 335 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 MC5RP33032 325 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 GBX2P52951 348 aaPredicted RBP6.87□□□□□ -1.31
SMG6-218ENST00000575454 GNGT1P63211 74 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 HTD2P86397 168 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 LRRC36Q1X8D7 754 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 DNAL1Q4LDG9 190 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 MORN2Q502X0 79 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 RNLSQ5VYX0 342 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 UNQ5815/PRO19632Q6UWF5 114 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 ZNF833PQ6ZTB9 187 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 GAPTQ8N292 157 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 OR2AK2Q8NG84 335 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 OR51A2Q8NGJ7 313 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 OR2K2Q8NGT1 345 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 GPR148Q8TDV2 347 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 CASTOR1Q8WTX7 329 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 TMEM106AQ96A25 262 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 MS4A10Q96PG2 267 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 CIB1Q99828 191 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 TAF9BQ9HBM6 251 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 ZNF581Q9P0T4 197 aa6.87□□□□□ -1.31
SMG6-218ENST00000575454 RCC2Q9P258 522 aaKnown RBP6.87□□□□□ -1.31
SMG6-218ENST00000575454 EXOGQ9Y2C4 368 aaKnown RBP6.87□□□□□ -1.31
SMG6-218ENST00000575454 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 GYG2O15488 501 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 YPEL1O60688 119 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 TPPPO94811 219 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 LY6G6CO95867 125 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 EGR2P11161 476 aaPredicted RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 FCGR1AP12314 374 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 SERPINA2P20848 420 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 AADACP22760 399 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 BDKRB2P30411 391 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 POLR2IP36954 125 aaKnown RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 GYS2P54840 703 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 SNRPGP62308 76 aaKnown RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 NDPQ00604 133 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 SLC22A6Q4U2R8 563 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 DDI2Q5TDH0 399 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 RAB12Q6IQ22 244 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 LAX1Q8IWV1 398 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 LFNGQ8NES3 379 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 OR4K15Q8NH41 348 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 RBMXL1Q96E39 390 aaKnown RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 RDH12Q96NR8 316 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 YPEL2Q96QA6 119 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 PDCD1LG2Q9BQ51 273 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 THAP7Q9BT49 309 aaPredicted RBP6.86□□□□□ -1.31
SMG6-218ENST00000575454 ALG8Q9BVK2 526 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 ZNF355PQ9NSJ1 428 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 TAS2R4Q9NYW5 299 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 POMPQ9Y244 141 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 FBXO7Q9Y3I1 522 aa6.86□□□□□ -1.31
SMG6-218ENST00000575454 FAM90A7PA6NKC0 464 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 FAM90A23PA8MXZ1 464 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 RAB29O14966 203 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 SLC22A1O15245 554 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 ATP8B1O43520 1251 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 AIREO43918 545 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 SC5DO75845 299 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 OR2A4O95047 310 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 RCC1P18754 421 aaPredicted RBP6.85□□□□□ -1.31
SMG6-218ENST00000575454 PPP1CCP36873 323 aaKnown RBP6.85□□□□□ -1.31
SMG6-218ENST00000575454 SOX2P48431 317 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 LHFPL3Q86UP9 236 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 POC5Q8NA72 575 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 CCDC197Q8NCU1 140 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 RGP1Q92546 391 aaPredicted RBP6.85□□□□□ -1.31
SMG6-218ENST00000575454 GALMQ96C23 342 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 LGALS12Q96DT0 336 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms