RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ADIRFQ15847 76 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 GTF3AQ92664 365 aaKnown RBP13.78□□□□□ -0.2
RAB40B-206ENST00000571995 FANCFQ9NPI8 374 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 VDAC1P21796 283 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 SRPXP78539 464 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 OR4A16Q8NH70 328 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 GPR146Q96CH1 333 aa13.78□□□□□ -0.2
RAB40B-206ENST00000571995 TMPRSS2O15393 492 aa13.77□□□□□ -0.2
RAB40B-206ENST00000571995 SPP1P10451 314 aa13.77□□□□□ -0.2
RAB40B-206ENST00000571995 ASB13Q8WXK3 278 aa13.77□□□□□ -0.2
RAB40B-206ENST00000571995 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.2
RAB40B-206ENST00000571995 MYOZ1Q9NP98 299 aaPredicted RBP13.77□□□□□ -0.2
RAB40B-206ENST00000571995 HSF4Q9ULV5 492 aa13.77□□□□□ -0.2
RAB40B-206ENST00000571995 NUP210LQ5VU65 1888 aa13.77□□□□□ -0.2
RAB40B-206ENST00000571995 LAMA5O15230 3695 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 C9JQL5 133 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 MKRN2OSH3BPM6 223 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 CECR9P0C854 216 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 F2RP25116 425 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 SSTP61278 116 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 LHX4Q969G2 390 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 BIN3Q9NQY0 253 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 TP53TG5Q9Y2B4 290 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 MYO9AB2RTY4 2548 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 TRAV24A0A0B4J272 114 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 FAM90A27PA6NNH2 459 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 HLA-DRB3P79483 266 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 OR5P3Q8WZ94 311 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 FBLN5Q9UBX5 448 aa13.77□□□□□ -0.21
RAB40B-206ENST00000571995 IGHV3-48P01763 117 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 NQO2P16083 231 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 HOXA1P49639 335 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 CCL20P78556 96 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 SMIM21Q3B7S5 101 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 PDLIM3Q53GG5 364 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 SELENOHQ8IZQ5 122 aaKnown RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 PPP1R35Q8TAP8 253 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 PINX1Q96BK5 328 aaKnown RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 SMCO4Q9NRQ5 59 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 ACTL6BO94805 426 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 BHLHA15Q7RTS1 189 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 FAM117AQ9C073 453 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 PQLC2LA1A4F0 135 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 C7orf77A4D0Y5 90 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 MSMO1Q15800 293 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 ABHD5Q8WTS1 349 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 OR2V2Q96R30 315 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 FGF23Q9GZV9 251 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-206ENST00000571995 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
RAB40B-206ENST00000571995 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 OR2C1O95371 312 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 HBZP02008 142 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 ADCYAP1P18509 176 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 DBX1A6NMT0 343 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 DNASE2O00115 360 aaPredicted RBP13.75□□□□□ -0.21
RAB40B-206ENST00000571995 DVL1P1P54792 670 aaPredicted RBP13.75□□□□□ -0.21
RAB40B-206ENST00000571995 HBG1P69891 147 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 HBG2P69892 147 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 SH2D2AQ9NP31 389 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 ADGRG4Q8IZF6 3080 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 NAT1P18440 290 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 ERVFRD-1P60508 538 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 BCL2L2Q92843 193 aaPredicted RBP13.75□□□□□ -0.21
RAB40B-206ENST00000571995 PRO3102Q9H379 93 aa13.75□□□□□ -0.21
RAB40B-206ENST00000571995 NDUFA6P56556 154 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 ZNF787Q6DD87 383 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 MSI2Q96DH6 328 aaKnown RBP13.74□□□□□ -0.21
RAB40B-206ENST00000571995 CCL13Q99616 98 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 A0A0G2JRQ6 117 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 SYNGR2O43760 224 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
RAB40B-206ENST00000571995 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 SMPD2O60906 423 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 SULT1A2P50226 295 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 ZNF665Q9H7R5 613 aa13.74□□□□□ -0.21
RAB40B-206ENST00000571995 IGKV1-6A0A0C4DH72 117 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 CD55P08174 381 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 HIST1H3AP68431 136 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 HIST2H3AQ71DI3 136 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 SLC16A13Q7RTY0 426 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 FRZBQ92765 325 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 NIPSNAP3BQ9BS92 247 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 RNF122Q9H9V4 155 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 POLQO75417 2590 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 ZNF891A8MT65 544 aaPredicted RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 PSPNO60542 156 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
RAB40B-206ENST00000571995 MMP9P14780 707 aa13.73□□□□□ -0.21
RAB40B-206ENST00000571995 TNFSF4P23510 183 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms