RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 C5orf56Q8N8D9 126 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 GALMQ96C23 342 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 EAF1Q96JC9 268 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 YPEL2Q96QA6 119 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 CHCHD6Q9BRQ6 235 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 CENPOQ9BU64 300 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 Q9N2K0 584 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 OR1A1Q9P1Q5 309 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 JPT1Q9UK76 154 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 SSR3Q9UNL2 185 aa8.13□□□□□ -1.11
GTF3C1-213ENST00000571886 IGKV1-6A0A0C4DH72 117 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 M0QZ24 198 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 ST8SIA5O15466 376 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 CD3GP09693 182 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 SNRPBP14678 240 aaKnown RBP8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 GNB3P16520 340 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 CD36P16671 472 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 OR3A3P47888 321 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 F2RL1P55085 397 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 MXD1Q05195 221 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 ARSJQ5FYB0 599 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 C9orf152Q5JTZ5 239 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 ZNF554Q86TJ5 538 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 Q8N6K4 173 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 DTX3Q8N9I9 347 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 OR56B1Q8NGI3 324 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 OR10R2Q8NGX6 335 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 FAM110DQ8TAY7 271 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 IL1F10Q8WWZ1 152 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 RITA1Q96K30 269 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 CITED2Q99967 270 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 CMSS1Q9BQ75 279 aaKnown RBP8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 ABHD14AQ9BUJ0 271 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 PLSCR3Q9NRY6 295 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
GTF3C1-213ENST00000571886 LOC100506127A0A0U1RQW1 187 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 MFNGO00587 321 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 LANCL1O43813 399 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 PROP1O75360 226 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 FBXO24O75426 580 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 RAB6AP20340 208 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 IL3RAP26951 378 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 CD1BP29016 333 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 LINC00205P59089 165 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 HLA-DRB3P79483 266 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 NSUN5P1Q3KNT7 163 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 TMEM30BQ3MIR4 351 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 LY6G6FQ5SQ64 297 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 STEAP3Q658P3 488 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 TGIF2LXQ8IUE1 241 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 IZUMO1Q8IYV9 350 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 Q8N9W7 124 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 OR5AU1Q8NGC0 362 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 OR5H6Q8NGV6 325 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 MAFIPQ8WZ33 124 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 RAB3CQ96E17 227 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 ABHD14BQ96IU4 210 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 NOL4LQ96MY1 436 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 NABP2Q9BQ15 211 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 ZNF251Q9BRH9 671 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 MRPL20Q9BYC9 149 aaKnown RBP8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 IFI27L2Q9H2X8 130 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 RIMS4Q9H426 269 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 RAB9BQ9NP90 201 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 DAPK2Q9UIK4 370 aa8.11□□□□□ -1.11
GTF3C1-213ENST00000571886 A0A075B6Q4 140 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 IGKV1D-8A0A087WSZ0 117 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 SAA2-SAA4A0A096LPE2 208 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 NCBP2LA6PVI3 153 aaKnown RBP8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 PLXNB1O43157 2135 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 CSF1P09603 554 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 GSTT2P0CG29 244 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 GSTT2BP0CG30 244 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 SAA2P0DJI9 122 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 CNTFRP26992 372 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 CEACAM6P40199 344 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 CD83Q01151 205 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 LSAMPQ13449 338 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 RPL39P5Q59GN2 51 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 ZNF833PQ6ZTB9 187 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 CENPVQ7Z7K6 275 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 TPRA1Q86W33 373 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 TSPAN14Q8NG11 270 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 OR2T10Q8NGZ9 312 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 AKR1E2Q96JD6 320 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 KCTD7Q96MP8 289 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 ATG5Q9H1Y0 275 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 MMP27Q9H306 513 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 ABRACLQ9P1F3 81 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 SLC23A1Q9UHI7 598 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 SCOCQ9UIL1 159 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 RNF150Q9ULK6 438 aa8.1□□□□□ -1.11
GTF3C1-213ENST00000571886 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
GTF3C1-213ENST00000571886 TRIM64CA6NLI5 447 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms