RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ZNF134P52741 427 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 GP2P55259 537 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 RPS27AP62979 156 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 GNMTQ14749 295 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 LIPKQ5VXJ0 399 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 FOXB2Q5VYV0 432 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR10K2Q6IF99 312 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR2W3Q7Z3T1 314 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 STPG2Q8N412 459 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 Q8N9W7 124 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR8H1Q8NGG4 311 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 KCNG3Q8TAE7 436 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 MRPL30Q8TCC3 161 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 RASL11BQ9BPW5 248 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 ABCG5Q9H222 651 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZNF736B4DX44 427 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 LANCL1O43813 399 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 RGS11O94810 467 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 UCHL1P09936 223 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 HSMCR30P0CW71 290 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 SRMP19623 302 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 HTR2CP28335 458 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 SLC6A1P30531 599 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 PPP1CCP36873 323 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 IRF3Q14653 427 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 MORN2Q502X0 79 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 C1orf100Q5SVJ3 147 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR52L2PQ8NGH6 319 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR6M1Q8NGM8 313 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 NRG4Q8WWG1 115 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 GALMQ96C23 342 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 CYYR1Q96J86 154 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 S1PR3Q99500 378 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 SULT4A1Q9BR01 284 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 GON7Q9BXV9 100 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 VCX3BQ9H321 246 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 CHMP1AQ9HD42 196 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZFP57Q9NU63 452 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 ABRACLQ9P1F3 81 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
CTDNEP1-205ENST00000570828 SLC22A1O15245 554 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 RGS10O43665 173 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 MYF6P23409 242 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 SOX6P35712 828 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 HTD2P86397 168 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 UNC119Q13432 240 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 LSAMPQ13449 338 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 TEX38Q6PEX7 206 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 MOB1BQ7L9L4 216 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 C6orf201Q7Z4U5 140 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 OR2AK2Q8NG84 335 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 DPF1Q92782 380 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 FAAP24Q9BTP7 215 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 TM2D1Q9BX74 207 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 KCNK15Q9H427 330 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 PLGRKTQ9HBL7 147 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 STEAP1Q9UHE8 339 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 LRRC42Q9Y546 428 aa9.74□□□□□ -0.85
CTDNEP1-205ENST00000570828 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 TMEM14DPA8MWL7 114 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 ARSBP15848 533 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 VDAC1P21796 283 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 PSMA1P25786 263 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 BLVRBP30043 206 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 THBS3P49746 956 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 MMDQ15546 238 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 TRAM1Q15629 374 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 HMGN3Q15651 99 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 PNLIPRP3Q17RR3 467 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 CXorf66Q5JRM2 361 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZNF695Q8IW36 515 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 FAM71E2Q8N5Q1 922 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 SETD6Q8TBK2 473 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 IL1F10Q8WWZ1 152 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 NICN1Q9BSH3 213 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 URM1Q9BTM9 101 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 DUSP21Q9H596 190 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 PLSCR3Q9NRY6 295 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 PLEKHJ1Q9NW61 149 aa9.73□□□□□ -0.85
CTDNEP1-205ENST00000570828 SLC17A2O00624 439 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 YPEL1O60688 119 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 SLC2A2P11168 524 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 CPEP16870 476 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 HSPA13P48723 471 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 F2RL1P55085 397 aa9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 RPS25P62851 125 aaKnown RBP9.72□□□□□ -0.85
CTDNEP1-205ENST00000570828 MLLT11Q13015 90 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms