RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KRTAP27-1Q3LI81 207 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 Q6ZRM9 215 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 C20orf144Q9BQM9 153 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 SEMA5BQ9P283 1151 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 ZNF32P17041 273 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 UBE2NP61088 152 aaKnown RBP13.13□□□□□ -0.31
SMG6-207ENST00000570756 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
SMG6-207ENST00000570756 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMG6-207ENST00000570756 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 OR10J5Q8NHC4 309 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 RASL10BQ96S79 203 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 TMEM38BQ9NVV0 291 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 NPSP0C0P6 89 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 BCL3P20749 454 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 IZUMO4Q1ZYL8 232 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 WFIKKN1Q96NZ8 548 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 STRADBQ9C0K7 418 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 SLC25A22Q9H936 323 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
SMG6-207ENST00000570756 A0A0U1RQK1 487 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 ZNF320A2RRD8 509 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1D-33P01593 117 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1-33P01594 117 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 PRSS8Q16651 343 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 RAET1LQ5VY80 246 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 TNFSF11O14788 317 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 TNFSF13O75888 250 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 PCSK4Q6UW60 755 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
SMG6-207ENST00000570756 HSPB6O14558 160 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 CHRNA7P36544 502 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 PCBD1P61457 104 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 ZNF324BQ6AW86 544 aaPredicted RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 TMEM256Q8N2U0 113 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 OR10G9Q8NGN4 311 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 OR10G7Q8NGN6 311 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 TMEM106BQ9NUM4 274 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 A6NNC1 897 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 FAM90A26D6RGX4 464 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 LILRA1O75019 489 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 B4GALT1P15291 398 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 WNT5AP41221 380 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 PCP4P48539 62 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 PSG4Q00888 419 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 TLE1Q04724 770 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 TMEM144Q7Z5S9 345 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 SF3B5Q9BWJ5 86 aaKnown RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
SMG6-207ENST00000570756 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
SMG6-207ENST00000570756 A0A1W2PR77 199 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
SMG6-207ENST00000570756 MLNRO43193 412 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 DKK1O94907 266 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 IRF2P14316 349 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 COX5AP20674 150 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 CD27P26842 260 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 TPPP2P59282 170 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 FOXL1Q12952 345 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 ATP6V1FQ16864 119 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 ACSM6Q6P461 480 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 RLN3Q8WXF3 142 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 LPAR2Q9HBW0 351 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 LIN7CQ9NUP9 197 aaKnown RBP13.1□□□□□ -0.31
SMG6-207ENST00000570756 ZDBF2Q9HCK1 2354 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 IFNL4K9M1U5 179 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 GCH1P30793 250 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 BRS3P32247 399 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 C21orf62-AS1Q17RA5 79 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 TEX43Q6ZNM6 134 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 GPR35Q9HC97 309 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms