RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RGS10O43665 173 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CPEP16870 476 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CRHBPP24387 322 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 RANBP1P43487 201 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CFHR3Q02985 330 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PNLIPRP3Q17RR3 467 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 KHDC1LQ5JSQ8 128 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ZNF833PQ6ZTB9 187 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MRPL41Q8IXM3 137 aaKnown RBP13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 P2RX4Q99571 388 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 RASL11BQ9BPW5 248 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 VCX3BQ9H321 246 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 LINC01548A6NM66 108 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 FOXI3A8MTJ6 420 aaPredicted RBP13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 RRP9O43818 475 aaKnown RBP13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ARL6IP5O75915 188 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PRB2P02812 416 aaPredicted RBP13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ELANEP08246 267 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MYCNOSP40205 109 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 HSPA13P48723 471 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 FOXE3Q13461 319 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 GNMTQ14749 295 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 NKAPLQ5M9Q1 402 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 OR10K2Q6IF99 312 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 C6orf201Q7Z4U5 140 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 OR52L2PQ8NGH6 319 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CYYR1Q96J86 154 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 GFI1Q99684 422 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 NICN1Q9BSH3 213 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 FAAP24Q9BTP7 215 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MCRIP2Q9BUT9 160 aaKnown RBP13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 LPAR5Q9H1C0 372 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 GHITMQ9H3K2 345 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ABRACLQ9P1F3 81 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MGAT4AQ9UM21 535 aa13.43□□□□□ -0.26
MAP1LC3B-208ENST00000570189 A0A0A6YYD4 124 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 IGHG4P01861 327 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 SOX6P35712 828 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PPP1CCP36873 323 aaKnown RBP13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 F2RL1P55085 397 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ZNF695Q8IW36 515 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MRAPQ8TCY5 172 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 NABP2Q9BQ15 211 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 URM1Q9BTM9 101 aaKnown RBP13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 IFI27L2Q9H2X8 130 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 LINC00527Q9UJ94 153 aa13.42□□□□□ -0.26
MAP1LC3B-208ENST00000570189 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ARSBP15848 533 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 BLVRBP30043 206 aaPredicted RBP13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CDX1P47902 265 aaPredicted RBP13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 OR2AK2Q8NG84 335 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MYOZ3Q8TDC0 251 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MGLLQ99685 303 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 HSPB9Q9BQS6 159 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PLEKHJ1Q9NW61 149 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PIPOXQ9P0Z9 390 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 STEAP1Q9UHE8 339 aa13.41□□□□□ -0.26
MAP1LC3B-208ENST00000570189 SAA2-SAA4A0A096LPE2 208 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 SAA2P0DJI9 122 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 OR5H8P0DN80 308 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PSMD7P51665 324 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 RPS25P62851 125 aaKnown RBP13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 C8orf86Q6ZUL3 223 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 KLHL30-AS1Q8NEE0 82 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 NPBQ8NG41 125 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 TMEM203Q969S6 136 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ZNF251Q9BRH9 671 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 KCNK15Q9H427 330 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ACOT13Q9NPJ3 140 aa13.4□□□□□ -0.26
MAP1LC3B-208ENST00000570189 LDLRAD4O15165 306 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 NDUFA3O95167 84 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PSMB8P28062 276 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ACTBP60709 375 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 MMDQ15546 238 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C18orf65Q6ZTR6 163 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR8U1Q8NH10 309 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PLGRKTQ9HBL7 147 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 SLC23A1Q9UHI7 598 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ZNF107Q9UII5 783 aaPredicted RBP13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 BLOC1S6Q9UL45 172 aa13.39□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 NUDT19A8MXV4 375 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RAB29O14966 203 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 NBR2O15453 112 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 SOCS1O15524 211 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RPLP1P05386 114 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 VDAC1P21796 283 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PPIFP30405 207 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 TMEM50BP56557 158 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 FABP5Q01469 135 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RAB11BQ15907 218 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms