RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RRP9O43818 475 aaKnown RBP10.35□□□□□ -0.75
CNOT1-220ENST00000569916 CD1BP29016 333 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 HNF4GQ14541 408 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 LY6G6FQ5SQ64 297 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 TGIF2LXQ8IUE1 241 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 LYG1Q8N1E2 194 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 FAM110DQ8TAY7 271 aaPredicted RBP10.35□□□□□ -0.75
CNOT1-220ENST00000569916 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
CNOT1-220ENST00000569916 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
CNOT1-220ENST00000569916 C12orf4Q9NQ89 552 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 ABRACLQ9P1F3 81 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 RAB22AQ9UL26 194 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 STUB1Q9UNE7 303 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 A0A0B4J203 849 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 SMIM30A4D0T7 59 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 ZNF736B4DX44 427 aaPredicted RBP10.34□□□□□ -0.75
CNOT1-220ENST00000569916 LANCL1O43813 399 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 RGS11O94810 467 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 MOGAT2Q3SYC2 334 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 C9orf152Q5JTZ5 239 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 NDUFA11Q86Y39 141 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 OR5AU1Q8NGC0 362 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 OR2T10Q8NGZ9 312 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
CNOT1-220ENST00000569916 MOSP00540 346 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 SLC2A2P11168 524 aaPredicted RBP10.33□□□□□ -0.76
CNOT1-220ENST00000569916 RAB6AP20340 208 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 LSAMPQ13449 338 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 NSUN5P1Q3KNT7 163 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 OR2AK2Q8NG84 335 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
CNOT1-220ENST00000569916 CMSS1Q9BQ75 279 aaKnown RBP10.33□□□□□ -0.76
CNOT1-220ENST00000569916 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
CNOT1-220ENST00000569916 OR51E2Q9H255 320 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 Q9N2K0 584 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 MGAT4AQ9UM21 535 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 SSR3Q9UNL2 185 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
CNOT1-220ENST00000569916 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 NOTOA8MTQ0 251 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 RAB27BO00194 218 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 MFNGO00587 321 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
CNOT1-220ENST00000569916 CD83Q01151 205 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 NEDD8Q15843 81 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 TCTEX1D4Q5JR98 221 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 ZNF833PQ6ZTB9 187 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 CENPVQ7Z7K6 275 aaPredicted RBP10.32□□□□□ -0.76
CNOT1-220ENST00000569916 Q8N9W7 124 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 OR10R2Q8NGX6 335 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 PTX4Q96A99 478 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 RAB3CQ96E17 227 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 MRPL20Q9BYC9 149 aaKnown RBP10.32□□□□□ -0.76
CNOT1-220ENST00000569916 PLSCR3Q9NRY6 295 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 OR1A1Q9P1Q5 309 aa10.32□□□□□ -0.76
CNOT1-220ENST00000569916 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 IGHG2P01859 326 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 OPN1MWP04001 364 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 SCTP09683 121 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 OPN1MW2P0DN77 364 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 OPN1MW3P0DN78 364 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 OR3A3P47888 321 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 FAM71F2Q6NXP2 309 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 TPRA1Q86W33 373 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 ZNF251Q9BRH9 671 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 CHCHD6Q9BRQ6 235 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 RNF167Q9H6Y7 350 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 LIN7CQ9NUP9 197 aaKnown RBP10.31□□□□□ -0.76
CNOT1-220ENST00000569916 SLC23A1Q9UHI7 598 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
CNOT1-220ENST00000569916 IGKV1-6A0A0C4DH72 117 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 NCBP2LA6PVI3 153 aaKnown RBP10.3□□□□□ -0.76
CNOT1-220ENST00000569916 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 FCGR3AP08637 254 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 CD3GP09693 182 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 HIST1H1DP16402 221 aaKnown RBP10.3□□□□□ -0.76
CNOT1-220ENST00000569916 GNB3P16520 340 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 CD36P16671 472 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 ZBTB25P24278 435 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 GADD45AP24522 165 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 SFXN4Q6P4A7 337 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 FAM71E2Q8N5Q1 922 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 OR4X2Q8NGF9 303 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 OR8H1Q8NGG4 311 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 KCTD7Q96MP8 289 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 NOL4LQ96MY1 436 aaPredicted RBP10.3□□□□□ -0.76
CNOT1-220ENST00000569916 S1PR3Q99500 378 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 ABCG5Q9H222 651 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 PIPOXQ9P0Z9 390 aa10.3□□□□□ -0.76
CNOT1-220ENST00000569916 A0A075B6Q4 140 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 PSMB11A5LHX3 300 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms