RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	FAM221A	A4D161	298 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	NKX2-8	O15522	239 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	PHF1	O43189	567 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF205	O95201	554 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	MMP7	P09237	267 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	WT1	P19544	449 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	HIST1H3A	P68431	136 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	RUNX1	Q01196	453 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	RNF151	Q2KHN1	245 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	DOK3	Q7L591	496 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	C17orf78	Q8N4C9	275 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	LRFN3	Q9BTN0	628 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ELOVL1	Q9BW60	279 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	CALHM2	Q9HA72	323 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF319	Q9P2F9	582 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	TM4SF5	O14894	197 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	CHRNB4	P30926	498 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	RRAD	P55042	308 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	MRPS34	P82930	218 aa	Known RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	PLGLB1	Q02325	96 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	DPPA3	Q6W0C5	159 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	MEX3B	Q6ZN04	569 aa	Known RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF100	Q8IYN0	542 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	TMEM252	Q8N6L7	170 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	TMEM18	Q96B42	140 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	TP53RK	Q96S44	253 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	MIEN1	Q9BRT3	115 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	HIPK2	Q9H2X6	1198 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF552	Q9H707	407 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	SDF2L1	Q9HCN8	221 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF407	Q9C0G0	2248 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ASPM	Q8IZT6	3477 aa		10.25	□□□□□ -0.77
SPG7-222	ENST00000569820	ZFP92	A6NM28	416 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	HPRT1	P00492	218 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CCL1	P22362	96 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	DTYMK	P23919	212 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CTSS	P25774	331 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	APOBEC3A	P31941	199 aa	Predicted RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	GUCA1A	P43080	201 aa	Predicted RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	NKX2-1	P43699	371 aa	Predicted RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	TNFSF10	P50591	281 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	GRB2	P62993	217 aa	Known RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	VAMP2	P63027	116 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	PMS2P11	Q13670	270 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	P2RY6	Q15077	328 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	AAED1	Q7RTV5	226 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	MRPL41	Q8IXM3	137 aa	Known RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	ACY3	Q96HD9	319 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	C11orf1	Q9H5F2	150 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	LYRM2	Q9NU23	88 aa	Predicted RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	KLRC4-KLRK1	H3BQV0	150 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	SSSCA1	O60232	199 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CST7	O76096	145 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CDS2	O95674	445 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CEACAM1	P13688	526 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	OR10J1	P30954	320 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	OPRM1	P35372	400 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	PDLIM4	P50479	330 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	DYNLT3	P51808	116 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	FAM27B	Q5VT28	67 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	ZNF66	Q6ZN08	573 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	FAM57B	Q71RH2	274 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	TMPRSS7	Q7RTY8	843 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	LHFPL4	Q7Z7J7	247 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	GJC3	Q8NFK1	279 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	OR2D3	Q8NGH3	330 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	C20orf144	Q9BQM9	153 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	VPS25	Q9BRG1	176 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	CISD1	Q9NZ45	108 aa	Known RBP	10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	LAMP3	Q9UQV4	416 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	MYO7B	Q6PIF6	2116 aa		10.24	□□□□□ -0.77
SPG7-222	ENST00000569820	IGKV3D-15	A0A087WSY6	115 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	MSTN	O14793	375 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	LCAT	P04180	440 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	BCL2	P10415	239 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	FCGR2A	P12318	317 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	TUBG1	P23258	451 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	SRY	Q05066	204 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	UBE2V1	Q13404	147 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	CRIP3	Q6Q6R5	217 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	LYG1	Q8N1E2	194 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	TMEM217	Q8N7C4	229 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	OR11L1	Q8NGX0	322 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	TMEM45B	Q96B21	275 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	TMEM38B	Q9NVV0	291 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	RIF1	Q5UIP0	2472 aa	Known RBP	10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	ZFHX4	Q86UP3	3567 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	TRAV1-1	A0A0B4J248	108 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	C5orf63	A6NC05	138 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	NKX2-6	A6NCS4	301 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	PROB1	E7EW31	1015 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820		E9PLN8	166 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	OTX1	P32242	354 aa	Predicted RBP	10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	ARG2	P78540	354 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	MPV17L	Q2QL34	196 aa		10.23	□□□□□ -0.77
SPG7-222	ENST00000569820	WDR25	Q64LD2	544 aa	Predicted RBP	10.23	□□□□□ -0.77

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