RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LRRC10Q5BKY1 277 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 ANKRD33Q7Z3H0 272 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 ZNF683Q8IZ20 524 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 PXMP4Q9Y6I8 212 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 TRPM3Q9HCF6 1732 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-216ENST00000569240 LOC107984156A0A0G2JMH3 177 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 J3QW42 95 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 M0R3E3 92 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 OR9G9P0C7N8 305 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 LYL1P12980 280 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 CTLA4P16410 223 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 MGAT2Q10469 447 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 CALHM1Q8IU99 346 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 ARL17AQ8IVW1 177 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 SPEM1Q8N4L4 309 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 OR8B12Q8NGG6 310 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
CNOT1-216ENST00000569240 SPACA5Q96QH8 159 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 GDF15Q99988 308 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 SCNM1Q9BWG6 230 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 AICDAQ9GZX7 198 aa6.2□□□□□ -1.42
CNOT1-216ENST00000569240 CNIH1O95406 144 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 REG1AP05451 166 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 C8orf88P0DMB2 117 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 KIR3DL2P43630 455 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 RPS16P62249 146 aaKnown RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 OTPQ5XKR4 325 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 NRSN2Q9GZP1 204 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 SLC25A10Q9UBX3 287 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 GOLGA4Q13439 2230 aaKnown RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 CA1P00915 261 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 IGHV2-5P01817 119 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 THY1P04216 161 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 NR0B2Q15466 257 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 AGBL5Q8NDL9 886 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 ZNF816Q0VGE8 651 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 CIRBPQ14011 172 aaKnown RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 OLIG3Q7RTU3 272 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 LRRC75AQ8NAA5 344 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 OR1N1Q8NGS0 311 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 SMIM14Q96QK8 99 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 OR8B2Q96RD0 313 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 KLHDC2Q9Y2U9 406 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 GJB3O75712 270 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 CLDN14O95500 239 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 PPBPP02775 128 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 PTGER1P34995 402 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 RBM11P57052 281 aaKnown RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 DNM1P46Q6ZS02 220 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 WNT16Q9UBV4 365 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 SERGEFQ9UGK8 458 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 AMMECR1Q9Y4X0 333 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 RICTORQ6R327 1708 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 A0A0G2JMM0 328 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 A0A1W2PPB8 328 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 KIR3DP1A8MWS1 328 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 HSPB6O14558 160 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 KLF4O43474 513 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 ASAH2BP0C7U1 165 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 EFNB2P52799 333 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 OR1L8Q8NGR8 309 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 MESP1Q9BRJ9 268 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 UCP1P25874 307 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 RNPS1Q15287 305 aaKnown RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 SPACA9Q96E40 222 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-216ENST00000569240 TM2D1Q9BX74 207 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 ATP23Q9Y6H3 246 aa6.19□□□□□ -1.42
CNOT1-216ENST00000569240 AKAP11Q9UKA4 1901 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 NRG2O14511 850 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 RAMP1O60894 148 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 DXOO77932 396 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 BGLAPP02818 100 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 GABRG2P18507 467 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 RFLNAQ6ZTI6 216 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 SELENOHQ8IZQ5 122 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 A0A1W2PQM1 296 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ICAM4Q14773 271 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 MED29Q9NX70 200 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ZNF716A6NP11 495 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 RPL23P62829 140 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 FADS6Q8N9I5 356 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 OR4D11Q8NGI4 311 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 G6PC2Q9NQR9 355 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 A0A1B0GUL6 1792 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 USP34Q70CQ2 3546 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 RGPD8O14715 1765 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ARAP2Q8WZ64 1704 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 A8MWV9 139 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 HMGA1P17096 107 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 OPRK1P41145 380 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 NANOS3P60323 173 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 SLC25A40Q8TBP6 338 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 PRSS27Q9BQR3 290 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 EMC6Q9BV81 110 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 CLEC1BQ9P126 229 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 GLI3P10071 1580 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 C9JCJ5 164 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms