RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PURGQ9UJV8 347 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 STARD10Q9Y365 291 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 STRAPQ9Y3F4 350 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 KPTNQ9Y664 436 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 NSD1Q96L73 2696 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 COL6A5A8TX70 2615 aa4.46□□□□□ -1.69
CAPN3-217ENST00000567817 IGHV3-15A0A0B4J1V0 119 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 FAM230AA0A1W2PPH8 454 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 BTBD17A6NE02 478 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 MBD3L5A6NJ08 208 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OR5B21A6NL26 309 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 UMAD1C9J7I0 102 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ZNF587BE7ETH6 402 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 H7C2Y5 167 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 TRIM77I1YAP6 450 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 TOR1AO14656 332 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ST8SIA3O43173 380 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 CXCL13O43927 109 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 GPR137BO60478 399 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 TRAPPC6AO75865 159 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 TSPAN9O75954 239 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 NDUFB8O95169 186 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ACTL6AO96019 429 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 SFTPBP07988 381 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 MMP7P09237 267 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 WNT2P09544 360 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 B4GALT1P15291 398 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 GLRA1P23415 457 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 RPL12P30050 165 aaKnown RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OTX2P32243 289 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 CAV2P51636 162 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 CCL11P51671 97 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 RBM11P57052 281 aaKnown RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 S100A10P60903 97 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 FGF12P61328 243 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 BAXQ07812 192 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OR8G1Q15617 311 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 TAF9Q16594 264 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 HYAL4Q2M3T9 481 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 CEACAM16Q2WEN9 425 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 PABPC1L2AQ5JQF8 200 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 FAM74A1Q5RGS3 127 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 PLCXD3Q63HM9 321 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ZNF774Q6NX45 483 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 UNQ6126/PRO20091Q6UXV3 157 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 YRDCQ86U90 279 aaKnown RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 MKXQ8IYA7 352 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ZDHHC23Q8IYP9 409 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 CMTM1Q8IZ96 169 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 BPIFCQ8NFQ6 507 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OR10AD1Q8NGE0 317 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OR5L1Q8NGL2 311 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 OR1S2Q8NGQ3 325 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ITLN2Q8WWU7 325 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 IL22RA2Q969J5 263 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 FER1L6-AS2Q96M78 137 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ALKBH3Q96Q83 286 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 FOXC2Q99958 501 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 MICU1Q9BPX6 476 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 SLC25A31Q9H0C2 315 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 WDR13Q9H1Z4 485 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ZNF442Q9H7R0 627 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 AKIRIN1Q9H9L7 192 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 SLC2A9Q9NRM0 540 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 P4HTMQ9NXG6 502 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 GSKIPQ9P0R6 139 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 LUZP4Q9P127 313 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 LRFN1Q9P244 771 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 AK3Q9UIJ7 227 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 LAMP3Q9UQV4 416 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ST3GAL6Q9Y274 331 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 NOSIPQ9Y314 301 aaKnown RBP4.46□□□□□ -1.7
CAPN3-217ENST00000567817 MPC1Q9Y5U8 109 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 ATRQ13535 2644 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 JMJD1CQ15652 2540 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 SEC16AO15027 2179 aa4.46□□□□□ -1.7
CAPN3-217ENST00000567817 DCHS2Q6V1P9 2916 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 SPTBP11277 2137 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 TRBV6-6A0A0A6YYG2 114 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 ARGFXA6NJG6 315 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 F8W036 122 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 RHODO00212 210 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 LGALS8O00214 317 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 SDCBPO00560 298 aaPredicted RBP4.45□□□□□ -1.7
CAPN3-217ENST00000567817 HSPA12AO43301 675 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 MED6O75586 246 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 ADAP1O75689 374 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 SCO1O75880 301 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 HOXB5P09067 269 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 FAM157CP0CG43 387 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 SLC25A6P12236 298 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 ZNF708P17019 499 aa4.45□□□□□ -1.7
CAPN3-217ENST00000567817 KLK2P20151 261 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms