RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 IFNA21P01568 189 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 SNRNP70P08621 437 aaKnown RBP19.65■□□□□ 0.74
LINC00543-201ENST00000567234 RAB32Q13637 225 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 TMEM187Q14656 261 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 DOLPP1Q86YN1 238 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 FAM71E2Q8N5Q1 922 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 OR10C1Q96KK4 312 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 BORCS7-ASMTA0A0B4J1R7 106 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 SLC33A1O00400 549 aaPredicted RBP19.65■□□□□ 0.74
LINC00543-201ENST00000567234 RPL12P30050 165 aaKnown RBP19.65■□□□□ 0.74
LINC00543-201ENST00000567234 RND3P61587 244 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 HERPUD1Q15011 391 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 Q6ZR03 302 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 C11orf53Q8IXP5 236 aa19.65■□□□□ 0.74
LINC00543-201ENST00000567234 GAR1Q9NY12 217 aaKnown RBP19.65■□□□□ 0.74
LINC00543-201ENST00000567234 M0R036 132 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 OR8U9P0C7N5 309 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 HIST1H1BP16401 226 aaKnown RBP19.64■□□□□ 0.73
LINC00543-201ENST00000567234 ZNF83P51522 516 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 HLA-DRB3P79483 266 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 C20orf204Q6ZNR8 217 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 ZGRF1Q86YA3 2104 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 CISD2Q8N5K1 135 aaKnown RBP19.64■□□□□ 0.73
LINC00543-201ENST00000567234 OR8U1Q8NH10 309 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 RNASE11Q8TAA1 199 aaKnown RBP19.64■□□□□ 0.73
LINC00543-201ENST00000567234 CABLES2Q9BTV7 478 aa19.64■□□□□ 0.73
LINC00543-201ENST00000567234 CRYAAP02489 173 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 PHLDA2Q53GA4 152 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 ZNF497Q6ZNH5 498 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 MRGPRGQ86SM5 289 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 ZNF565Q8N9K5 539 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 KCNJ16Q9NPI9 418 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 ZNF835Q9Y2P0 537 aa19.63■□□□□ 0.73
LINC00543-201ENST00000567234 IGKV1-6A0A0C4DH72 117 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 OR5AC1P0C628 307 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 CLINT1Q14677 625 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 PCSK4Q6UW60 755 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 LIAT1Q6ZQX7 453 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 GINS3Q9BRX5 216 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 PRORYQ9H606 182 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 ITPR1Q14643 2758 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 ATRXP46100 2492 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 UMAD1C9J7I0 102 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 NPIPB11E5RHQ5 1161 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 M0R1B8 84 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 NDUFS6O75380 124 aaKnown RBP19.62■□□□□ 0.73
LINC00543-201ENST00000567234 DEDDO75618 318 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 GNRHRP30968 328 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 GLRXP35754 106 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 PRR30Q53SZ7 412 aaPredicted RBP19.62■□□□□ 0.73
LINC00543-201ENST00000567234 GPR157Q5UAW9 335 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 ADAM5Q6NVV9 412 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 REC114Q7Z4M0 266 aa19.62■□□□□ 0.73
LINC00543-201ENST00000567234 TPRP12270 2363 aaKnown RBP19.62■□□□□ 0.73
LINC00543-201ENST00000567234 PKD1L2Q7Z442 2459 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 BTBD17A6NE02 478 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 SIRPB1O00241 398 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 MPPED1O15442 326 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 KCNAB3O43448 404 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 SRPXP78539 464 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 KIAA0141Q14154 515 aaPredicted RBP19.61■□□□□ 0.73
LINC00543-201ENST00000567234 GFRALQ6UXV0 394 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 LGI3Q8N145 548 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 LILRB2Q8N423 598 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 SIRT7Q9NRC8 400 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 FBXL17Q9UF56 701 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 FZR1Q9UM11 496 aa19.61■□□□□ 0.73
LINC00543-201ENST00000567234 ACACBO00763 2458 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 hCG_1809904A0A1W2PP81 198 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 A0A1W2PR64 198 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 A0A1W2PRV1 198 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 HAND1O96004 215 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 IGHV3-13P01766 116 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 NKX6-1P78426 367 aaPredicted RBP19.6■□□□□ 0.73
LINC00543-201ENST00000567234 IAH1Q2TAA2 248 aaPredicted RBP19.6■□□□□ 0.73
LINC00543-201ENST00000567234 GGNBP1Q5YKI7 109 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 WDR82Q6UXN9 313 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 PRR7Q8TB68 274 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 MSI2Q96DH6 328 aaKnown RBP19.6■□□□□ 0.73
LINC00543-201ENST00000567234 C18orf12Q96KH6 178 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 MSL2Q9HCI7 577 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 ELOVL5Q9NYP7 299 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 C3orf80F5H4A9 247 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 MIDNQ504T8 468 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 FAM24BQ8N5W8 94 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 OR11L1Q8NGX0 322 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 OR10J5Q8NHC4 309 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 PLPPR1Q8TBJ4 325 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 MBNL3Q9NUK0 354 aaKnown RBP19.6■□□□□ 0.73
LINC00543-201ENST00000567234 WIPI2Q9Y4P8 454 aa19.6■□□□□ 0.73
LINC00543-201ENST00000567234 TRBV23-1A0A0A0MS06 115 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 A0A0G2JNJ9 132 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 TMEM8BA6NDV4 472 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 E5RGE8 158 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 PTBP3O95758 552 aaKnown RBP19.59■□□□□ 0.73
LINC00543-201ENST00000567234 BMP5P22003 454 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 CD200P41217 278 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 PKIAP61925 76 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 SP6Q3SY56 376 aa19.59■□□□□ 0.73
LINC00543-201ENST00000567234 PYY3Q5JQD4 70 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms