RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ZNF695Q8IW36 515 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 ODF3L1Q8IXM7 274 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 OR10V1Q8NGI7 309 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 FAM46BQ96A09 425 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 YPEL2Q96QA6 119 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 RASL11BQ9BPW5 248 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 ACOT13Q9NPJ3 140 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
COMMD4-216ENST00000567023 IGHG4P01861 327 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 ELANEP08246 267 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 UCHL1P09936 223 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 VSIG8P0DPA2 414 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 SRMP19623 302 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 PSMA1P25786 263 aaKnown RBP11.18□□□□□ -0.62
COMMD4-216ENST00000567023 CHATP28329 748 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 SOX6P35712 828 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-216ENST00000567023 LSAMPQ13449 338 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 FOXE3Q13461 319 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 TRAM1Q15629 374 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 GLT8D1Q68CQ7 371 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 CEACAM19Q7Z692 300 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 TMEM203Q969S6 136 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 GALMQ96C23 342 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 CYYR1Q96J86 154 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 TM2D1Q9BX74 207 aa11.18□□□□□ -0.62
COMMD4-216ENST00000567023 WI2-2373I1.2A0A1W2PRP0 233 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
COMMD4-216ENST00000567023 RPS25P62851 125 aaKnown RBP11.17□□□□□ -0.62
COMMD4-216ENST00000567023 RPS27AP62979 156 aaKnown RBP11.17□□□□□ -0.62
COMMD4-216ENST00000567023 QRFPP83859 136 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 KIR2DS1Q14954 304 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 SPARTQ8N0X7 666 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 DPF1Q92782 380 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 NEDD4LQ96PU5 975 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 HSPB9Q9BQS6 159 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 SULT4A1Q9BR01 284 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
COMMD4-216ENST00000567023 TMEM14DPA8MWL7 114 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 CCL24O00175 119 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 SLC22A1O15245 554 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 RGS11O94810 467 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 NAPSAO96009 420 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 PSMB8P28062 276 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 HTR2CP28335 458 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-216ENST00000567023 UNC119Q13432 240 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 GNMTQ14749 295 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 HMGN3Q15651 99 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 SSX1Q16384 188 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 CXorf66Q5JRM2 361 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-216ENST00000567023 OR10K2Q6IF99 312 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 ZNF880Q6PDB4 577 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 NABP2Q9BQ15 211 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 FAAP24Q9BTP7 215 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 TMEM59Q9BXS4 323 aa11.16□□□□□ -0.62
COMMD4-216ENST00000567023 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
COMMD4-216ENST00000567023 BPNT1O95861 308 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 OR5H8P0DN80 308 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 VDAC1P21796 283 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
COMMD4-216ENST00000567023 FABP5Q01469 135 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 NKAPLQ5M9Q1 402 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 ZNF773Q6PK81 442 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 CD200R1LQ6Q8B3 271 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 OR8U1Q8NH10 309 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
COMMD4-216ENST00000567023 NDUFB11Q9NX14 153 aa11.15□□□□□ -0.62
COMMD4-216ENST00000567023 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-216ENST00000567023 TRBV6-6A0A0A6YYG2 114 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 PPIFP30405 207 aaKnown RBP11.14□□□□□ -0.63
COMMD4-216ENST00000567023 ACTBP60709 375 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 MMDQ15546 238 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 FAM89BQ8N5H3 189 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 NPBQ8NG41 125 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 OR2AK2Q8NG84 335 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 OR6M1Q8NGM8 313 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 RITA1Q96K30 269 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 KCTD7Q96MP8 289 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 GHITMQ9H3K2 345 aa11.14□□□□□ -0.63
COMMD4-216ENST00000567023 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-216ENST00000567023 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms