RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CD2P06729 351 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
PALB2-205ENST00000567003 GTF2F2P13984 249 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 VEGFCP49767 419 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 NPBQ8NG41 125 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 ZNF184Q99676 751 aaPredicted RBP11.88□□□□□ -0.51
PALB2-205ENST00000567003 BANF2Q9H503 90 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 RETNQ9HD89 108 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 SAA2-SAA4A0A096LPE2 208 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 SNTNA6NMZ2 147 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 HSPA12AO43301 675 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 NDUFA3O95167 84 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 FADS2O95864 444 aaKnown RBP11.87□□□□□ -0.51
PALB2-205ENST00000567003 HSPB1P04792 205 aaKnown RBP11.87□□□□□ -0.51
PALB2-205ENST00000567003 LIMS3P0CW19 117 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 LIMS4P0CW20 117 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 SAA2P0DJI9 122 aaPredicted RBP11.87□□□□□ -0.51
PALB2-205ENST00000567003 ARSBP15848 533 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 CX3CL1P78423 397 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
PALB2-205ENST00000567003 HAGHQ16775 308 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 TMEM30BQ3MIR4 351 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 FAM131AQ6UXB0 335 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 LYPD6Q86Y78 171 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 SGPP2Q8IWX5 399 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 GAPTQ8N292 157 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 MUL1Q969V5 352 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 KRTAP17-1Q9BYP8 105 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 CST11Q9H112 138 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 PAK1IP1Q9NWT1 392 aaPredicted RBP11.87□□□□□ -0.51
PALB2-205ENST00000567003 ORC6Q9Y5N6 252 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 GMPPBQ9Y5P6 360 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 PEX16Q9Y5Y5 336 aa11.87□□□□□ -0.51
PALB2-205ENST00000567003 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
PALB2-205ENST00000567003 TPPP2P59282 170 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 RIPK1Q13546 671 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 GLIPR1L1Q6UWM5 242 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
PALB2-205ENST00000567003 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 MRPS24Q96EL2 167 aaKnown RBP11.86□□□□□ -0.51
PALB2-205ENST00000567003 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 RAB9BQ9NP90 201 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 STUB1Q9UNE7 303 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 DNAH10Q8IVF4 4471 aa11.86□□□□□ -0.51
PALB2-205ENST00000567003 TRAV8-7A0A075B6U6 113 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 A8MZ25 164 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 ZNF780AO75290 641 aaPredicted RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 MAS1P04201 325 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 IGFBP3P17936 291 aaPredicted RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 RAB40BQ12829 278 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 PLGLAQ15195 96 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 OR2G6Q5TZ20 316 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 STEAP3Q658P3 488 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 ZNF660Q6AZW8 331 aaPredicted RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 SIGIRRQ6IA17 410 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 TRAT1Q6PIZ9 186 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 PPP1R27Q86WC6 154 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 ANKRD13BQ86YJ7 626 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 MYCBPQ99417 103 aaPredicted RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 SPACA1Q9HBV2 294 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 CHCHD3Q9NX63 227 aaKnown RBP11.85□□□□□ -0.51
PALB2-205ENST00000567003 ERGIC3Q9Y282 383 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
PALB2-205ENST00000567003 A0A1W2PPK0 400 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 RRHO14718 337 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 LALBAP00709 142 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 ETV1P50549 477 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 ACTBL2Q562R1 376 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 RPL39P5Q59GN2 51 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 JAGN1Q8N5M9 183 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 RHOVQ96L33 236 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 IFI27L2Q9H2X8 130 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
PALB2-205ENST00000567003 JPT1Q9UK76 154 aa11.84□□□□□ -0.51
PALB2-205ENST00000567003 SC5DO75845 299 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 JTBO76095 146 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 BAG2O95816 211 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 ALDH3A2P51648 485 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 DEFA5Q01523 94 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 CBR4Q8N4T8 237 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 ZFP41Q8N8Y5 198 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 APH1BQ8WW43 257 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 RDH12Q96NR8 316 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 TMED9Q9BVK6 235 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 PARP12Q9H0J9 701 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms