RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 LDLRAD3Q86YD5 345 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 OR8U1Q8NH10 309 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 ZNF486Q96H40 463 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-213ENST00000565834 GHITMQ9H3K2 345 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 ARHGAP32A7KAX9 2087 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 MMP23AO75900 390 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 GNRHRP30968 328 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 PIGPP57054 158 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 CLEC12BQ2HXU8 276 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 PHLDA2Q53GA4 152 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 LRRC75A-AS1Q8N1F1 130 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 LY6G5BQ8NDX9 201 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 TMEM230Q96A57 120 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 OR51J1Q9H342 316 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 CCL28Q9NRJ3 127 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 ZNF221Q9UK13 617 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 KCNS2Q9ULS6 477 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 GPR31O00270 319 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 HSD17B6O14756 317 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 CREBL2O60519 120 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-213ENST00000565834 LIPFP07098 398 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 PPP1R1AQ13522 171 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 ZNF818PQ6ZRF7 136 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 OR2AK2Q8NG84 335 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 OR52B4Q8NGK2 314 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 SLC2A9Q9NRM0 540 aa15.41■□□□□ 0.06
COMMD4-213ENST00000565834 IGHV4-61A0A0C4DH41 118 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 C17orf98A8MV24 154 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 SNRPGP15A8MWD9 76 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 KIAA1324LA8MWY0 1029 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-213ENST00000565834 HLA-AP01891 365 aaKnown RBP15.4■□□□□ 0.06
COMMD4-213ENST00000565834 VAMP1P23763 118 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 DHODHQ02127 395 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 DHRS2Q13268 280 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 ZNF626Q68DY1 528 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 LYG2Q86SG7 212 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 CMTM1Q8IZ96 169 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 CCDC71LQ8N9Z2 235 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 FAM216AQ8WUB2 273 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 MBD6Q96DN6 1003 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 OR2D2Q9H210 308 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 PSG11Q9UQ72 335 aa15.4■□□□□ 0.06
COMMD4-213ENST00000565834 ASH1LQ9NR48 2969 aaKnown RBP15.39■□□□□ 0.05
COMMD4-213ENST00000565834 NBPF19A0A087WUL8 3843 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 TEX13DA0A0J9YY54 714 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-213ENST00000565834 A8MXK9 166 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 IGHV3-7P01780 117 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 SLC25A16P16260 332 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 ERVFRD-1P60508 538 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 LY6G6FQ5SQ64 297 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 ZNF431Q8TF32 576 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-213ENST00000565834 RTN4IP1Q8WWV3 396 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-213ENST00000565834 LEAP2Q969E1 77 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 ONECUT1Q9UBC0 465 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 RNF150Q9ULK6 438 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 MED13LQ71F56 2210 aa15.39■□□□□ 0.05
COMMD4-213ENST00000565834 hCG_1809904A0A1W2PP81 198 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 A0A1W2PPE2 198 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 A0A1W2PR64 198 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 A0A1W2PRV1 198 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 C9orf170A2RU37 121 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 CRYM-AS1A6NIL9 109 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ITGB1BP1O14713 200 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ST8SIA5O15466 376 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 RBP4P02753 201 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 IGHV1-8P0DP01 117 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ZFP36P26651 326 aaKnown RBP15.38■□□□□ 0.05
COMMD4-213ENST00000565834 S100GP29377 79 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 RND3P61587 244 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 LCN2P80188 198 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 UTF1Q5T230 341 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 SGPP2Q8IWX5 399 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ZNF645Q8N7E2 425 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ABHD14AQ9BUJ0 271 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 UNC79Q9P2D8 2635 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 ENSAO43768 121 aaKnown RBP15.38■□□□□ 0.05
COMMD4-213ENST00000565834 SSNA1O43805 119 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 FOXH1O75593 365 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 RAB7AP51149 207 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 C11orf88Q6PI97 169 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 C11orf42Q8N5U0 333 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 BVESQ8NE79 360 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 AKR1E2Q96JD6 320 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 AGMATQ9BSE5 352 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 SUCNR1Q9BXA5 334 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 MED28Q9H204 178 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 SESN1Q9Y6P5 492 aa15.38■□□□□ 0.05
COMMD4-213ENST00000565834 HECTD1Q9ULT8 2610 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 SLC22A5O76082 557 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 SFT2D2O95562 160 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 GNG10P50151 68 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 ZNF134P52741 427 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 RRAS2P62070 204 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-213ENST00000565834 SUPT4H1P63272 117 aaKnown RBP15.37■□□□□ 0.05
COMMD4-213ENST00000565834 Q3ZCU0 254 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 DRAM1Q8N682 238 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 ZNF439Q8NDP4 499 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 CASTOR1Q8WTX7 329 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 DMRTB1Q96MA1 342 aa15.37■□□□□ 0.05
COMMD4-213ENST00000565834 NAA60Q9H7X0 242 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms