RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ECI1P42126 302 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 OR3A3P47888 321 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 ACTBP60709 375 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
TCF4-228ENST00000565393 PLGLAQ15195 96 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 DEFB136Q30KP8 78 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 C1orf100Q5SVJ3 147 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 ZNF554Q86TJ5 538 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 LRRTM1Q86UE6 522 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 LYPD6Q86Y78 171 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 GAPTQ8N292 157 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 OR2AK2Q8NG84 335 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 OR11H1Q8NG94 326 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 MRPL30Q8TCC3 161 aaKnown RBP5.03□□□□□ -1.6
TCF4-228ENST00000565393 FBLIM1Q8WUP2 373 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 PHYHIPQ92561 330 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 CYYR1Q96J86 154 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 KCTD7Q96MP8 289 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 OR5B12Q96R08 314 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 SULT4A1Q9BR01 284 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 URM1Q9BTM9 101 aaKnown RBP5.03□□□□□ -1.6
TCF4-228ENST00000565393 ABHD14AQ9BUJ0 271 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 TMEM59Q9BXS4 323 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 MRPL20Q9BYC9 149 aaKnown RBP5.03□□□□□ -1.6
TCF4-228ENST00000565393 PLGRKTQ9HBL7 147 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 PARP11Q9NR21 331 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 FKBP14Q9NWM8 211 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 JPT1Q9UK76 154 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 RNF150Q9ULK6 438 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 TRAV41A0A0B4J266 112 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 SEC14L6B5MCN3 397 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 G3V318 75 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 CASQ2O14958 399 aaPredicted RBP5.02□□□□□ -1.61
TCF4-228ENST00000565393 RAB29O14966 203 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 NBR2O15453 112 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ST8SIA5O15466 376 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 SOCS1O15524 211 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 HSPA12AO43301 675 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 IGF1P05019 195 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ARSBP15848 533 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ZBTB25P24278 435 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 CNTFRP26992 372 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 CHATP28329 748 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 MC5RP33032 325 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ZNF137PP52743 207 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 LSAMPQ13449 338 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 P2RY14Q15391 338 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ZNF260Q3ZCT1 412 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 C9orf66Q5T8R8 295 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 LIPKQ5VXJ0 399 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 RNLSQ5VYX0 342 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 GLDNQ6ZMI3 551 aaPredicted RBP5.02□□□□□ -1.61
TCF4-228ENST00000565393 ODF3L1Q8IXM7 274 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 FAM71E2Q8N5Q1 922 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 OR1N2Q8NGR9 330 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ABHD5Q8WTS1 349 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 C4orf3Q8WVX3 66 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 UFD1Q92890 307 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 CLCC1Q96S66 551 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 NABP2Q9BQ15 211 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 CHCHD6Q9BRQ6 235 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 NICN1Q9BSH3 213 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 ANKRD60Q9BZ19 345 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 KLK15Q9H2R5 256 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 OR51J1Q9H342 316 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 RIMS4Q9H426 269 aaPredicted RBP5.02□□□□□ -1.61
TCF4-228ENST00000565393 KCNK15Q9H427 330 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.02□□□□□ -1.61
TCF4-228ENST00000565393 PIPOXQ9P0Z9 390 aa5.02□□□□□ -1.61
TCF4-228ENST00000565393 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
TCF4-228ENST00000565393 AK6Q9Y3D8 172 aaKnown RBP5.02□□□□□ -1.61
TCF4-228ENST00000565393 SAA2-SAA4A0A096LPE2 208 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 IGHV7-81A0A0B4J1V7 117 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 SLC22A1O15245 554 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ATP6V0E1O15342 81 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 RGS10O43665 173 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 ARL6IP5O75915 188 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 LY86O95711 162 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 BPNT1O95861 308 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 SCTP09683 121 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 UCHL1P09936 223 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 SAA2P0DJI9 122 aaPredicted RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 CT45A6P0DMU7 189 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 CT45A5P0DMU8 189 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 CT45A7P0DMV0 189 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 PSMB8P28062 276 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 CD40LGP29965 261 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 PPIFP30405 207 aaKnown RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 RANBP1P43487 201 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 VEGFCP49767 419 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 RAB9AP51151 201 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 LUMP51884 338 aaPredicted RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 CX3CL1P78423 397 aa5.01□□□□□ -1.61
TCF4-228ENST00000565393 MRPS15P82914 257 aaKnown RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 TMEM267Q0VDI3 215 aaPredicted RBP5.01□□□□□ -1.61
TCF4-228ENST00000565393 DCTN2Q13561 401 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms