RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SPIN2BQ9BPZ2 258 aa12.93□□□□□ -0.34
COMMD4-210ENST00000564587 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
COMMD4-210ENST00000564587 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
COMMD4-210ENST00000564587 CALYQ9NYX4 217 aa12.93□□□□□ -0.34
COMMD4-210ENST00000564587 SLC25A10Q9UBX3 287 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-210ENST00000564587 PAIP2BQ9ULR5 123 aaKnown RBP12.93□□□□□ -0.34
COMMD4-210ENST00000564587 KBTBD11-OT1A0A1B0GTJ5 212 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 L7N2F9 121 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 RGS13O14921 159 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 ADAP1O75689 374 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 CDS2O95674 445 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 RPA2P15927 270 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 SSTR5P35346 364 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 SP6Q3SY56 376 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 LGALSLQ3ZCW2 172 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-210ENST00000564587 GGNBP1Q5YKI7 109 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 WDR89Q96FK6 387 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-210ENST00000564587 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-210ENST00000564587 DCAF16Q9NXF7 216 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 GNG12Q9UBI6 72 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 LINC00312Q9Y6C7 94 aa12.92□□□□□ -0.34
COMMD4-210ENST00000564587 COL12A1Q99715 3063 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 FXYD6-FXYD2A0A087WZ82 144 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 A0A0D9SG52 128 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 GPR37O15354 613 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 ADAM20O43506 726 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 MPC2O95563 127 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 DANCRP0C864 163 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 NDUFB7P17568 137 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 RAB7AP51149 207 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 CATR1Q13166 79 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 IAH1Q2TAA2 248 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-210ENST00000564587 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 TGIF2LYQ8IUE0 185 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 RAB39BQ96DA2 213 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 TP53RKQ96S44 253 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 GAL3ST2Q9H3Q3 398 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 PLSCR3Q9NRY6 295 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 GAB2Q9UQC2 676 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 KLF2Q9Y5W3 355 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-210ENST00000564587 ROS1P08922 2347 aa12.91□□□□□ -0.34
COMMD4-210ENST00000564587 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 OR2F2O95006 317 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 RLN2P04090 185 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 SERPINE2P07093 398 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 IL15RAQ13261 267 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 OR2F1Q13607 317 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 Q3ZCU0 254 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 MORN2Q502X0 79 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 TMEM268Q5VZI3 342 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 UBALD1Q8TB05 177 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 RBPMSQ93062 196 aaKnown RBP12.9□□□□□ -0.34
COMMD4-210ENST00000564587 TIMD4Q96H15 378 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 OR10C1Q96KK4 312 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 PRR13Q9NZ81 148 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
COMMD4-210ENST00000564587 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.35
COMMD4-210ENST00000564587 PKDREJQ9NTG1 2253 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 A6NNC1 897 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 ARPC5O15511 151 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 ATG12O94817 140 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 LYL1P12980 280 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 SELLP14151 372 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 VDAC1P21796 283 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 PPP1CCP36873 323 aaKnown RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 RPL31P62899 125 aaKnown RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 ZNF345Q14585 488 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 PRSS54Q6PEW0 395 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 SELENOHQ8IZQ5 122 aaKnown RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 RAB1CQ92928 201 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
COMMD4-210ENST00000564587 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 OR2D2Q9H210 308 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 GFOD1Q9NXC2 390 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 IDI2-AS1Q9NZ38 188 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 DSCAML1Q8TD84 2053 aa12.89□□□□□ -0.35
COMMD4-210ENST00000564587 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 SLC25A6P12236 298 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 S100A11P31949 105 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 LOXL3P58215 753 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 IFITM2Q01629 132 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms