RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SLC25A46Q96AG3 418 aa13.86□□□□□ -0.19
USB1-209ENST00000564387 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 IGKV1-6A0A0C4DH72 117 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 TRDCB7Z8K6 153 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 HSD17B6O14756 317 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 TIMM23O14925 209 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 GSTP1P09211 210 aaKnown RBP13.85□□□□□ -0.19
USB1-209ENST00000564387 SCTP09683 121 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 CD3GP09693 182 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 IL3RAP26951 378 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 NCS1P62166 190 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 ZNF260Q3ZCT1 412 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 CDNFQ49AH0 187 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 FBLN7Q53RD9 439 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 HACD4Q5VWC8 232 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 TMEM219Q86XT9 240 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 DTX3Q8N9I9 347 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 NPFFR1Q9GZQ6 430 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 ABCG5Q9H222 651 aa13.85□□□□□ -0.19
USB1-209ENST00000564387 LANCL1O43813 399 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 FAM106CPP0CH98 169 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 DTYMKP23919 212 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 CD24P25063 80 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 VBP1P61758 197 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 HERPUD1Q15011 391 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 DRAM1Q8N682 238 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 OR4A4PQ8NGN8 299 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 SETD6Q8TBK2 473 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 WFDC12Q8WWY7 111 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 KCTD12Q96CX2 325 aaKnown RBP13.84□□□□□ -0.19
USB1-209ENST00000564387 RBM14Q96PK6 669 aaKnown RBP13.84□□□□□ -0.19
USB1-209ENST00000564387 AGMATQ9BSE5 352 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 ABHD14AQ9BUJ0 271 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
USB1-209ENST00000564387 ELF5Q9UKW6 265 aaPredicted RBP13.84□□□□□ -0.19
USB1-209ENST00000564387 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
USB1-209ENST00000564387 TXNL1O43396 289 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 OR2F2O95006 317 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 ZBTB25P24278 435 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 KIR2DS1Q14954 304 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 SHISA2Q6UWI4 295 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 IZUMO1Q8IYV9 350 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 OR4C13Q8NGP0 309 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 OR56B4Q8NH76 319 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 IL1F10Q8WWZ1 152 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 CABLES2Q9BTV7 478 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 DCSTAMPQ9H295 470 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 IFI27L2Q9H2X8 130 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 GHITMQ9H3K2 345 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 ZNF702PQ9H963 129 aa13.83□□□□□ -0.2
USB1-209ENST00000564387 AMY1AP04745 511 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 AMY2AP04746 511 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 CD1BP29016 333 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 SERPINB10P48595 397 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 MRPS15P82914 257 aaKnown RBP13.82□□□□□ -0.2
USB1-209ENST00000564387 PITPNAQ00169 270 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 PNLIPRP3Q17RR3 467 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 C11orf88Q6PI97 169 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 ZNF833PQ6ZTB9 187 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 Q8N6K4 173 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 OR2AK2Q8NG84 335 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 ZNF251Q9BRH9 671 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 OR1A1Q9P1Q5 309 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 SLC23A1Q9UHI7 598 aa13.82□□□□□ -0.2
USB1-209ENST00000564387 A0A075B6Q4 140 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 TRBV6-7A0A0A0MS04 114 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 FABP7O15540 132 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
USB1-209ENST00000564387 CEACAM6P40199 344 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 REG1BP48304 166 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 KRTAP10-3P60369 221 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 BLCAPP62952 87 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 ARFRP1Q13795 201 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 GPR107Q5VW38 600 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 GPR141Q7Z602 305 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 TGIF2LXQ8IUE1 241 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 LYG1Q8N1E2 194 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 CAPSLQ8WWF8 208 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 AKR1E2Q96JD6 320 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 CMTM3Q96MX0 182 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 CITED1Q99966 193 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 SLC25A33Q9BSK2 321 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
USB1-209ENST00000564387 SERTAD4Q9NUC0 356 aa13.81□□□□□ -0.2
USB1-209ENST00000564387 ZNF230Q9UIE0 474 aaPredicted RBP13.81□□□□□ -0.2
USB1-209ENST00000564387 TMEM235A6NFC5 223 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 M0QZK8 103 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 SSX5O60225 188 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 LPLP06858 475 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 GSTT2P0CG29 244 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 GSTT2BP0CG30 244 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 Q6ZS46 218 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 OR2T6Q8NHC8 308 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 EDARADDQ8WWZ3 215 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
USB1-209ENST00000564387 DIABLOQ9NR28 239 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 PIPOXQ9P0Z9 390 aa13.8□□□□□ -0.2
USB1-209ENST00000564387 TRAV18A0A075B6X5 111 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms