RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 C14orf166Q9Y224 244 aaKnown RBP8.35□□□□□ -1.07
SMG1-208ENST00000563448 LOC105371242A0A075B767 164 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 A8MXK9 166 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 HSD17B6O14756 317 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 IGHV3-7P01780 117 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 OR8U9P0C7N5 309 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 AKR1C4P17516 323 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 NFYBP25208 207 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 ZNF134P52741 427 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 PPP1R1AQ13522 171 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 OR8U1Q8NH10 309 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 LEAP2Q969E1 77 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 MBD6Q96DN6 1003 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 RNF150Q9ULK6 438 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 WNK2Q9Y3S1 2297 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 FAM157AC9JC47 383 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 SLC31A2O15432 143 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 PIGPP57054 158 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 TAS2R31P59538 309 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 PAX2Q02962 417 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 TMEM30BQ3MIR4 351 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 PHLDA2Q53GA4 152 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 METTL11BQ5VVY1 283 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 CD276Q5ZPR3 534 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 LPCAT3Q6P1A2 487 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 FAHD2BQ6P2I3 314 aaPredicted RBP8.34□□□□□ -1.07
SMG1-208ENST00000563448 ZNF439Q8NDP4 499 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 RAB39BQ96DA2 213 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 FAHD2AQ96GK7 314 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
SMG1-208ENST00000563448 AGMATQ9BSE5 352 aa8.34□□□□□ -1.07
SMG1-208ENST00000563448 RBM7Q9Y580 266 aaKnown RBP8.34□□□□□ -1.07
SMG1-208ENST00000563448 VPS13CQ709C8 3753 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 APCP25054 2843 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 CENPEQ02224 2701 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 A0A1W2PPE3 182 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 GPR31O00270 319 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 ITGB1BP1O14713 200 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 ST8SIA5O15466 376 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 RGS11O94810 467 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 LIPFP07098 398 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 IGHV1-8P0DP01 117 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 UBE2MP61081 183 aaKnown RBP8.33□□□□□ -1.08
SMG1-208ENST00000563448 SUPT4H1P63272 117 aaKnown RBP8.33□□□□□ -1.08
SMG1-208ENST00000563448 LCN2P80188 198 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 ABCA11PQ4W5N1 156 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 ZNF626Q68DY1 528 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 EDARADDQ8WWZ3 215 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 DACT3Q96B18 629 aaPredicted RBP8.33□□□□□ -1.08
SMG1-208ENST00000563448 C5orf30Q96GV9 206 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 OR2D2Q9H210 308 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 OR51J1Q9H342 316 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 SLC2A9Q9NRM0 540 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 PSG11Q9UQ72 335 aa8.33□□□□□ -1.08
SMG1-208ENST00000563448 FASNP49327 2511 aaKnown RBP8.33□□□□□ -1.08
SMG1-208ENST00000563448 ABCA12Q86UK0 2595 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 A0A1W2PPH5 198 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 C9orf170A2RU37 121 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 SLC25A16P16260 332 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 DLX1P56177 255 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 RND3P61587 244 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 DHRS2Q13268 280 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 CT45A1Q5HYN5 189 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 LYG2Q86SG7 212 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 ZNF645Q8N7E2 425 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 Q8N7P7 452 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 BVESQ8NE79 360 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 OR2AK2Q8NG84 335 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 CT45A3Q8NHU0 189 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 ABHD14BQ96IU4 210 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 AKR1E2Q96JD6 320 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 GPHA2Q96T91 129 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 SUCNR1Q9BXA5 334 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 IFI27L2Q9H2X8 130 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 GPN1Q9HCN4 374 aaPredicted RBP8.32□□□□□ -1.08
SMG1-208ENST00000563448 ONECUT1Q9UBC0 465 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 POLQO75417 2590 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 A0A087X0M5 115 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 A0A096LNT2 108 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 A0A1B0GX30 115 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 SNRPGP15A8MWD9 76 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 TNFSF12O43508 249 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 SFT2D2O95562 160 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 HLA-AP01891 365 aaKnown RBP8.32□□□□□ -1.08
SMG1-208ENST00000563448 RBP4P02753 201 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 GNG10P50151 68 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 ARF6P62330 175 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 Q5PR19 223 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 DRAM1Q8N682 238 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 ZNF431Q8TF32 576 aaPredicted RBP8.32□□□□□ -1.08
SMG1-208ENST00000563448 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
SMG1-208ENST00000563448 RTN4IP1Q8WWV3 396 aaPredicted RBP8.32□□□□□ -1.08
SMG1-208ENST00000563448 ABHD14AQ9BUJ0 271 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms