RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 ODF3L1Q8IXM7 274 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 SVOPQ8N4V2 548 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 GHSRQ92847 366 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 UBE2E2Q96LR5 201 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 SPACA1Q9HBV2 294 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 C3orf84H3BNL1 204 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 MYL12BO14950 172 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 SC5DO75845 299 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 CD1AP06126 327 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 CHATP28329 748 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 RUNX1Q01196 453 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 SPHARQ15513 63 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 MMDQ15546 238 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 TMEM30BQ3MIR4 351 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 MORN2Q502X0 79 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 C6orf183Q5T699 404 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF773Q6PK81 442 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 LYPD6Q86Y78 171 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 OR52L2PQ8NGH6 319 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 PGLYRP3Q96LB9 341 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 MRPL20Q9BYC9 149 aaKnown RBP13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 BANF2Q9H503 90 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 PEX16Q9Y5Y5 336 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 DNAH1Q9P2D7 4330 aa13.04□□□□□ -0.32
HDGFL3-203ENST00000563404 TRBV5-7A0A0A0MS05 114 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 IGHV7-81A0A0B4J1V7 117 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 FAM90A10PA6NDY2 464 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 OR5H8P0DN80 308 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 FSTP19883 344 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 ACTBP60709 375 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF616Q08AN1 781 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 GPR176Q14439 515 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 Q499Y3 187 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 SBSPONQ8IVN8 264 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 SPARTQ8N0X7 666 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 NABP2Q9BQ15 211 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 OR51J1Q9H342 316 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 TAF9BQ9HBM6 251 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 OR2S2Q9NQN1 319 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 VSIG4Q9Y279 399 aa13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
HDGFL3-203ENST00000563404 A0A087WXM4 84 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 UBE2QL1A1L167 161 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 TRIM64CA6NLI5 447 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 LY86O95711 162 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 HLA-DRB1P01911 266 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 OR8U8P0C7N1 319 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 PPP1CCP36873 323 aaKnown RBP13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 DCUN1D4Q92564 292 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 MRPS24Q96EL2 167 aaKnown RBP13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 Q96M66 194 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 OR14A2Q96R54 314 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 ABHD14AQ9BUJ0 271 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 ACOT13Q9NPJ3 140 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 PARP11Q9NR21 331 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 SMAD5-AS1Q9Y6J3 95 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 TENM2Q9NT68 2774 aa13.02□□□□□ -0.33
HDGFL3-203ENST00000563404 EPPK1P58107 5090 aaKnown RBP13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 MGMTP16455 207 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 BLVRBP30043 206 aaPredicted RBP13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 OR3A3P47888 321 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 RAB9AP51151 201 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 INSL3P51460 131 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 NDPQ00604 133 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 DOC2BQ14184 412 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 YIF1BQ5BJH7 314 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 C19orf54Q5BKX5 351 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 AWAT2Q6E213 333 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 TMEM65Q6PI78 240 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 TRAT1Q6PIZ9 186 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 MINDY2Q8NBR6 621 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 CKLFQ9UBR5 152 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 FBXO7Q9Y3I1 522 aa13.01□□□□□ -0.33
HDGFL3-203ENST00000563404 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms