RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 C12orf54Q6X4T0 127 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 Q6ZS49 121 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 OR4A4PQ8NGN8 299 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 ST6GALNAC6Q969X2 333 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 BCL7BQ9BQE9 202 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 DIABLOQ9NR28 239 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 ELF5Q9UKW6 265 aaPredicted RBP13.43□□□□□ -0.26
CLK3-207ENST00000562389 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 TMEM235A6NFC5 223 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 ITGB1BP1O14713 200 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 FABP7O15540 132 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 TSPAN9O75954 239 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 DIRAS3O95661 229 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 GAPDHP04406 335 aaKnown RBP13.42□□□□□ -0.26
CLK3-207ENST00000562389 ZBTB25P24278 435 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 Q6ZSV7 163 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 CLVS1Q8IUQ0 354 aaPredicted RBP13.42□□□□□ -0.26
CLK3-207ENST00000562389 RAB2BQ8WUD1 216 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 ACOT12Q8WYK0 555 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 CFHR4Q92496 578 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 CABLES2Q9BTV7 478 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 SLC23A1Q9UHI7 598 aa13.42□□□□□ -0.26
CLK3-207ENST00000562389 ZNF230Q9UIE0 474 aaPredicted RBP13.42□□□□□ -0.26
CLK3-207ENST00000562389 TRAV18A0A075B6X5 111 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 IGHV1-3A0A0C4DH29 117 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 FAM90A9PA6NNJ1 464 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 TIMM23O14925 209 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 TXNL1O43396 289 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 LPLP06858 475 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 MDKP21741 143 aaPredicted RBP13.41□□□□□ -0.26
CLK3-207ENST00000562389 TMBIM6P55061 237 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 GNG2P59768 71 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
CLK3-207ENST00000562389 HERPUD1Q15011 391 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 C16orf82Q7Z2V1 217 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 THNSL2Q86YJ6 484 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 LYG1Q8N1E2 194 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 SAMD12Q8N8I0 201 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 OR2AK2Q8NG84 335 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 NUDCD2Q8WVJ2 157 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 RTN4IP1Q8WWV3 396 aaPredicted RBP13.41□□□□□ -0.26
CLK3-207ENST00000562389 S100A16Q96FQ6 103 aaKnown RBP13.41□□□□□ -0.26
CLK3-207ENST00000562389 CMTM3Q96MX0 182 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 TOLLIPQ9H0E2 274 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 C16orf95Q9H693 158 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 RANBP3Q9H6Z4 567 aaPredicted RBP13.41□□□□□ -0.26
CLK3-207ENST00000562389 BEX1Q9HBH7 125 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 OR1A1Q9P1Q5 309 aa13.41□□□□□ -0.26
CLK3-207ENST00000562389 HSPA12AO43301 675 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 XRCC3O43542 346 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 CD24P25063 80 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 REG1BP48304 166 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 ODF3L1Q8IXM7 274 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 OR56B4Q8NH76 319 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 EDARADDQ8WWZ3 215 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 MAFIPQ8WZ33 124 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 AP3S1Q92572 193 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 NPFFR1Q9GZQ6 430 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 IFI27L2Q9H2X8 130 aa13.4□□□□□ -0.26
CLK3-207ENST00000562389 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 LANCL1O43813 399 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 SSX5O60225 188 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 SNRNP70P08621 437 aaKnown RBP13.39□□□□□ -0.27
CLK3-207ENST00000562389 FAM106CPP0CH98 169 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 ZNF182P17025 639 aaPredicted RBP13.39□□□□□ -0.27
CLK3-207ENST00000562389 CEACAM6P40199 344 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 FBLN7Q53RD9 439 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 TGIF2LXQ8IUE1 241 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 OR4C13Q8NGP0 309 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 LINC01006Q8NI28 216 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 CAPSLQ8WWF8 208 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 PIPOXQ9P0Z9 390 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 COMMD3Q9UBI1 195 aa13.39□□□□□ -0.27
CLK3-207ENST00000562389 IGKV1D-8A0A087WSZ0 117 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 TRBV6-7A0A0A0MS04 114 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 OR2F2O95006 317 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 APOA1P02647 267 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 EIF4EP06730 217 aaKnown RBP13.38□□□□□ -0.27
CLK3-207ENST00000562389 SPCS2Q15005 226 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 IGSF11Q5DX21 431 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 MZT2AQ6P582 158 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 DTX3Q8N9I9 347 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 AKR1E2Q96JD6 320 aa13.38□□□□□ -0.27
CLK3-207ENST00000562389 RBM14Q96PK6 669 aaKnown RBP13.38□□□□□ -0.27
CLK3-207ENST00000562389 AGMATQ9BSE5 352 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms